RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 E4F1Q66K89 784 aaPredicted RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 MEX3BQ6ZN04 569 aaKnown RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 UNC5AQ6ZN44 842 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 CPNE8Q86YQ8 564 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 FAM20CQ8IXL6 584 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 KBTBD2Q8IY47 623 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 PRSS58Q8IYP2 241 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 DNAJC22Q8N4W6 341 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 SIRT6Q8N6T7 355 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 PLD5Q8N7P1 536 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 DNAJB8Q8NHS0 232 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 SUN3Q8TAQ9 357 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 DENND1AQ8TEH3 1009 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 TFGQ92734 400 aaPredicted RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 HAS2Q92819 552 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 TADA1Q96BN2 335 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 FAF2Q96CS3 445 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 MS4A3Q96HJ5 214 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 MAGED4Q96JG8 741 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 LINC00615Q96LM1 132 aaPredicted RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 RNF157Q96PX1 679 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 OR2A14Q96R47 310 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 SPSB2Q99619 263 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 SPOCK3Q9BQ16 436 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 CRB3Q9BUF7 120 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 MAK16Q9BXY0 300 aaKnown RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 OR52A5Q9H2C5 316 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 COG4Q9H9E3 785 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 GPAMQ9HCL2 828 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 EURLQ9NYK6 297 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 AIPL1Q9NZN9 384 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 FAM153AQ9UHL3 310 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 CRLS1Q9UJA2 301 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 TINAGQ9UJW2 476 aa7.03□□□□□ -1.28
VPS4A-203ENST00000564399 NXT1Q9UKK6 140 aaKnown RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 MRPS2Q9Y399 296 aaKnown RBP7.03□□□□□ -1.28
VPS4A-203ENST00000564399 CPAMD8Q8IZJ3 1885 aa7.02□□□□□ -1.28
VPS4A-203ENST00000564399 NSG1A0A0A6YYJ2 146 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 LOC285095A0A1B0GVY8 99 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 LRRD1A4D1F6 860 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 APOL1O14791 398 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 DSCR3O14972 297 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 SGTAO43765 313 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 WFS1O76024 890 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 SRP72O76094 671 aaKnown RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CHRM5P08912 532 aaPredicted RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 DRD2P14416 443 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 ACPPP15309 386 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 KDELR1P24390 212 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 PDHA2P29803 388 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 SHMT2P34897 504 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 NSG1P42857 185 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 OR1D4P47884 311 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CD151P48509 253 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CARSP49589 748 aaKnown RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 PRLHRP49683 370 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 TAS2R40P59535 323 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CSNK1G2P78368 415 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 FANCCQ00597 558 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 MYL5Q02045 173 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 OCA2Q04671 838 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 BOP1Q14137 746 aaKnown RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CDSNQ15517 529 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 TFDP3Q5H9I0 405 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 KDELC1Q6UW63 502 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 NPNTQ6UXI9 565 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 MCATQ8IVS2 390 aaKnown RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 METTL27Q8N6F8 245 aaPredicted RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 IPMKQ8NFU5 416 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 BRIX1Q8TDN6 353 aaKnown RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 RAPGEF5Q92565 580 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 C8orf44Q96CB5 159 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 TEKT5Q96M29 485 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 MESP1Q9BRJ9 268 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CHRNA10Q9GZZ6 450 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 SLC26A1Q9H2B4 701 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 VPS37BQ9H9H4 285 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CUTCQ9NTM9 273 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 SPHK1Q9NYA1 384 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CTSFQ9UBX1 484 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 FKBPLQ9UIM3 349 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 ICKQ9UPZ9 632 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 KLHL20Q9Y2M5 609 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 TDRKHQ9Y2W6 561 aaKnown RBP7.02□□□□□ -1.29
VPS4A-203ENST00000564399 PCDHGB6Q9Y5F9 930 aa7.02□□□□□ -1.29
VPS4A-203ENST00000564399 CSPG4Q6UVK1 2322 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 FLNAP21333 2647 aaKnown RBP7.01□□□□□ -1.29
VPS4A-203ENST00000564399 C2orf81A6NN90 581 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 FAM227AF5H4B4 570 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 PROSCO94903 275 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 WDPCPO95876 746 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 EPOP01588 193 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 CYP1A2P05177 515 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 PRR35P0CG20 571 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 ATP1B2P14415 290 aaPredicted RBP7.01□□□□□ -1.29
VPS4A-203ENST00000564399 NFKB1P19838 968 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 MAGP20916 626 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 CXCR2P25025 360 aa7.01□□□□□ -1.29
VPS4A-203ENST00000564399 MCM3P25205 808 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms