RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 CENPSQ8N2Z9 138 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 RASGEF1AQ8N9B8 481 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 SIPA1Q96FS4 1042 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 EGLN2Q96KS0 407 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 TRNAU1APQ9NX07 287 aaKnown RBP17.31■□□□□ 0.36
GDE1-203ENST00000564172 TSR3Q9UJK0 312 aaKnown RBP17.31■□□□□ 0.36
GDE1-203ENST00000564172 NDRG2Q9UN36 371 aaKnown RBP17.31■□□□□ 0.36
GDE1-203ENST00000564172 OR2AG2A6NM03 316 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 SYCE1LA8MT33 242 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 NPHS1O60500 1241 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 CIB2O75838 187 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 C7P10643 843 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 AOAHP28039 575 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 KCNJ8Q15842 424 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 PFKFB4Q16877 469 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 SEL1L3Q68CR1 1132 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 CYHR1Q6ZMK1 362 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 PCYOX1LQ8NBM8 494 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 Q9H521 79 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 PNPOQ9NVS9 261 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 SCML1Q9UN30 329 aa17.3■□□□□ 0.36
GDE1-203ENST00000564172 QSOX1O00391 747 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 PLRG1O43660 514 aaKnown RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 CTSCP53634 463 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 ZBTB16Q05516 673 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 MLF2Q15773 248 aaPredicted RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 CPSF7Q8N684 471 aaKnown RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 BEND7Q8N7W2 519 aaPredicted RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 ZNF781Q8N8C0 355 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 PTGR2Q8N8N7 351 aaPredicted RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 OR14C36Q8NHC7 312 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 L3HYPDHQ96EM0 354 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 CNDP1Q96KN2 507 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 MRGPRX1Q96LB2 322 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 DUSP12Q9UNI6 340 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 ZFR2Q9UPR6 939 aaKnown RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 TRPM6Q9BX84 2022 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 SUPT3HB4E1H0 165 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 MAN2B1O00754 1011 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 CBSLP0DN79 551 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 GFAPP14136 432 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 CBSP35520 551 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 HK3P52790 923 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 HSPA14Q0VDF9 509 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 TUBA3CQ13748 450 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 AGERQ15109 404 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 SFT2D3Q587I9 215 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 ZNF678Q5SXM1 525 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 DHDDSQ86SQ9 333 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 ADAMTSL2Q86TH1 951 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 GPSM1Q86YR5 675 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 SIX5Q8N196 739 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 PLA2G15Q8NCC3 412 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 SUN5Q8TC36 379 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 TMEM120AQ9BXJ8 343 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 MRPL1Q9BYD6 325 aaKnown RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 ILKAPQ9H0C8 392 aaPredicted RBP17.29■□□□□ 0.36
GDE1-203ENST00000564172 MMP17Q9ULZ9 603 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 RAP2CQ9Y3L5 183 aa17.29■□□□□ 0.36
GDE1-203ENST00000564172 CDK14O94921 469 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 SERPINB5P36952 375 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 HERVK_113P63132 956 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 GBX1Q14549 363 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 WSCD2Q2TBF2 565 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 SBSNQ6UWP8 590 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 MTDHQ86UE4 582 aaKnown RBP17.28■□□□□ 0.36
GDE1-203ENST00000564172 FBXO39Q8N4B4 442 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 LILRB4Q8NHJ6 448 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 CCDC138Q96M89 665 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 ERVK-6Q9BXR3 956 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 KCNK4Q9NYG8 393 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 K7EPI3 171 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 KPNA5O15131 536 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 KLK8O60259 260 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 FTH1P02794 183 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 PRLHRP49683 370 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 ADPRHP54922 357 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 AQP5P55064 265 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 PNCKQ6P2M8 343 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 TMEM220Q6QAJ8 160 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 ZNF852Q6ZMS4 543 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 RPS27LQ71UM5 84 aaKnown RBP17.28■□□□□ 0.36
GDE1-203ENST00000564172 LENG8Q96PV6 779 aaPredicted RBP17.28■□□□□ 0.36
GDE1-203ENST00000564172 GRIP2Q9C0E4 1043 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 TRIM39Q9HCM9 518 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 ARL8BQ9NVJ2 186 aa17.28■□□□□ 0.36
GDE1-203ENST00000564172 TMA7Q9Y2S6 64 aaKnown RBP17.28■□□□□ 0.36
GDE1-203ENST00000564172 PRR23AA6NEV1 266 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 NCF1BA6NI72 391 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 NCF1CA8MVU1 366 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 SUPT7LO94864 414 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 SIX3O95343 332 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 KRT75O95678 551 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 PAK4O96013 591 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 CHEK2O96017 543 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 ENO3P13929 434 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 NCF1P14598 390 aaPredicted RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 STT3AP46977 705 aa17.27■□□□□ 0.36
GDE1-203ENST00000564172 RPS21P63220 83 aaKnown RBP17.27■□□□□ 0.36
GDE1-203ENST00000564172 PRKAA1Q13131 559 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms