RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 GPR34Q9UPC5 381 aa9.53□□□□□ -0.88
UBFD1-203ENST00000564106 TRIM33Q9UPN9 1127 aa9.53□□□□□ -0.88
UBFD1-203ENST00000564106 RAXQ9Y2V3 346 aa9.53□□□□□ -0.88
UBFD1-203ENST00000564106 GPSM3Q9Y4H4 160 aa9.53□□□□□ -0.88
UBFD1-203ENST00000564106 OARD1Q9Y530 152 aa9.53□□□□□ -0.88
UBFD1-203ENST00000564106 KNTC1P50748 2209 aa9.53□□□□□ -0.88
UBFD1-203ENST00000564106 BAHCC1Q9P281 2608 aa9.52□□□□□ -0.88
UBFD1-203ENST00000564106 ASXL3Q9C0F0 2248 aa9.52□□□□□ -0.88
UBFD1-203ENST00000564106 URB1O60287 2271 aaKnown RBP9.52□□□□□ -0.89
UBFD1-203ENST00000564106 LY6G6EA0A0G2JKS1 128 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 POM121BA6NF01 834 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 IQCF5A8MTL0 148 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 UBXN8O00124 270 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 CDC7O00311 574 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 MATN2O00339 956 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 LIN7AO14910 233 aaPredicted RBP9.52□□□□□ -0.89
UBFD1-203ENST00000564106 TNFSF14O43557 240 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 MMP20O60882 483 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 PCDH8O95206 1070 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 SERPINA6P08185 405 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 HIST1H2AGP0C0S8 130 aaPredicted RBP9.52□□□□□ -0.89
UBFD1-203ENST00000564106 KITP10721 976 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 MTHFD2P13995 350 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 VCLP18206 1134 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 HIST1H2ADP20671 130 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 PIK3CGP48736 1102 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 AP1S2P56377 157 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 CDKL1Q00532 357 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 CYP4F3Q08477 520 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 CDC16Q13042 620 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 LCP2Q13094 533 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 GBX1Q14549 363 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 PFKFB4Q16877 469 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 BCL7AQ4VC05 210 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 TMEM259Q4ZIN3 620 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ZNF542PQ5EBM4 170 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ANKS6Q68DC2 871 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 RFLNAQ6ZTI6 216 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ACAD11Q709F0 780 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 FITM2Q8N6M3 262 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ZNF781Q8N8C0 355 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 PDPRQ8NCN5 879 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ASB12Q8WXK4 309 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ELMO1Q92556 727 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 TMEM159Q96B96 161 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ERP27Q96DN0 273 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 THOC1Q96FV9 657 aaKnown RBP9.52□□□□□ -0.89
UBFD1-203ENST00000564106 HIC2Q96JB3 615 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 HIST1H2AHQ96KK5 128 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 BMFQ96LC9 184 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 SLC30A3Q99726 388 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 HIST1H2AJQ99878 128 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 H2AFJQ9BTM1 129 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 C20orf27Q9GZN8 174 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 GSTO2Q9H4Y5 243 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 KCNK13Q9HB14 408 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 TRIM39Q9HCM9 518 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 SAR1AQ9NR31 198 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 ABCF3Q9NUQ8 709 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 GALPQ9UBC7 116 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 HEY2Q9UBP5 337 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 FTSJ1Q9UET6 329 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 KLF15Q9UIH9 416 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 PRSS21Q9Y6M0 314 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 U3KQA8 63 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 LRP4O75096 1905 aa9.52□□□□□ -0.89
UBFD1-203ENST00000564106 FASNP49327 2511 aaKnown RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 C17orf113A0A1B0GUU1 675 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 TMEM8BA6NDV4 472 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 TRABD2BA6NFA1 517 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 NEMP2A6NFY4 417 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 FFAR2O15552 330 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CDK14O94921 469 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CHEK2O96017 543 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CHRNGP07510 517 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 RPS17P08708 135 aaKnown RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 ANXA5P08758 320 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 GM2AP17900 193 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 ITGB6P18564 788 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CYP2A7P20853 494 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 SERPINB3P29508 390 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 EEF1DP29692 281 aaKnown RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CCR7P32248 378 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 RXRGP48443 463 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 HNMTP50135 292 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 IRX1P78414 480 aaPredicted RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 HSPA14Q0VDF9 509 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 SGCGQ13326 291 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 BOP1Q14137 746 aaKnown RBP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 PCBP2Q15366 365 aaKnown RBP eCLIP9.51□□□□□ -0.89
UBFD1-203ENST00000564106 PPP1R3AQ16821 1122 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 COL28A1Q2UY09 1125 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 PROX2Q3B8N5 592 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 ACSBG2Q5FVE4 666 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 SH2D4BQ5SQS7 431 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 SULT1C3Q6IMI6 304 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 EPGNQ6UW88 154 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 SBSNQ6UWP8 590 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CLNKQ7Z7G1 428 aa9.51□□□□□ -0.89
UBFD1-203ENST00000564106 CUZD1Q86UP6 607 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms