RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 FRG1Q14331 258 aaKnown RBP16.06■□□□□ 0.16
CDT1-202ENST00000562747 GBX1Q14549 363 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 COLEC12Q5KU26 742 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 DCAF12Q5T6F0 453 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 STEAP4Q687X5 459 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 UNC5AQ6ZN44 842 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 KMT5CQ86Y97 462 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 UNC5BQ8IZJ1 945 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 ZSCAN1Q8NBB4 408 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 CFAP36Q96G28 342 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 TEFMQ96QE5 360 aaKnown RBP16.06■□□□□ 0.16
CDT1-202ENST00000562747 WDR83Q9BRX9 315 aaKnown RBP16.06■□□□□ 0.16
CDT1-202ENST00000562747 ZPBPQ9BS86 351 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 SIDT1Q9NXL6 827 aaKnown RBP16.06■□□□□ 0.16
CDT1-202ENST00000562747 KLHL42Q9P2K6 505 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 POMT2Q9UKY4 750 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 PCDHB11Q9Y5F2 797 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 MRFAP1Q9Y605 127 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 COL12A1Q99715 3063 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 EIF3HO15372 352 aaKnown RBP eCLIP16.05■□□□□ 0.16
CDT1-202ENST00000562747 NELFEP18615 380 aaKnown RBP16.05■□□□□ 0.16
CDT1-202ENST00000562747 SEPHS1P49903 392 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 KPNA2P52292 529 aaKnown RBP16.05■□□□□ 0.16
CDT1-202ENST00000562747 MPP1Q00013 466 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 CAV1Q03135 178 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 TLE1Q04724 770 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 ABRQ12979 859 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 HP1BP3Q5SSJ5 553 aaPredicted RBP16.05■□□□□ 0.16
CDT1-202ENST00000562747 CYB5D1Q6P9G0 228 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 CEACAM20Q6UY09 585 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 KIAA0408Q6ZU52 694 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 GALNT7Q86SF2 657 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 DCUN1D3Q8IWE4 304 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 ZBTB2Q8N680 514 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 KCNJ9Q92806 393 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 NKD1Q969G9 470 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 SLC41A2Q96JW4 573 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 MAP3K3Q99759 626 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 PLAC1Q9HBJ0 212 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 GEMIN8Q9NWZ8 242 aaKnown RBP16.05■□□□□ 0.16
CDT1-202ENST00000562747 GRHL1Q9NZI5 618 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 ICKQ9UPZ9 632 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 TDRKHQ9Y2W6 561 aaKnown RBP16.05■□□□□ 0.16
CDT1-202ENST00000562747 B3GALT1Q9Y5Z6 326 aa16.05■□□□□ 0.16
CDT1-202ENST00000562747 SPENQ96T58 3664 aaKnown RBP16.05■□□□□ 0.16
CDT1-202ENST00000562747 IGHV5-51A0A0C4DH38 117 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 C2orf74A8MZ97 194 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 STMND1H3BQB6 276 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 BTN3A3O00478 584 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 BTN3A1O00481 513 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 HAUS5O94927 633 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 CLCN7P51798 805 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 TTLL9Q3SXZ7 439 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 ANKS6Q68DC2 871 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 C8orf74Q6P047 294 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 ZNF549Q6P9A3 640 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 CNSTQ6PJW8 725 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 ANKMY2Q8IV38 441 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 ADGRF3Q8IZF5 1079 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 FBXO36Q8NEA4 188 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 CFAP61Q8NHU2 1237 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 FOPNLQ96NB1 174 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 PHACTR1Q9C0D0 580 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 SLC25A18Q9H1K4 315 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 XKR8Q9H6D3 395 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 PPANQ9NQ55 473 aaKnown RBP16.04■□□□□ 0.16
CDT1-202ENST00000562747 C1GALT1Q9NS00 363 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 OR6C2Q9NZP2 312 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 RELNP78509 3460 aa16.04■□□□□ 0.16
CDT1-202ENST00000562747 DOPEY2Q9Y3R5 2298 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 GSAPA4D1B5 854 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 POLR1CO15160 346 aaPredicted RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 ZBTB11O95625 1053 aaPredicted RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 F7P08709 466 aaPredicted RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 TPBGLP0DKB5 382 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 SFTPCP11686 197 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 LIFP15018 202 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 CDH3P22223 829 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 PRDX3P30048 256 aaKnown RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 CCNFP41002 786 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 CARSP49589 748 aaKnown RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 IL11RAQ14626 422 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 FASTKD3Q14CZ7 662 aaKnown RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 KYNUQ16719 465 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 TEDDM1Q5T9Z0 273 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 TTC23LQ6PF05 361 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 PTRH1Q86Y79 214 aaKnown RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 ZBED8Q8IZ13 594 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 SIDT2Q8NBJ9 832 aaKnown RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 MNS1Q8NEH6 495 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 KIF18AQ8NI77 898 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 MAGEC3Q8TD91 643 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 SKA2Q8WVK7 121 aaPredicted RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 FAM136AQ96C01 138 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 AARSD1Q9BTE6 412 aaKnown RBP16.03■□□□□ 0.16
CDT1-202ENST00000562747 TWSG1Q9GZX9 223 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 ACTR10Q9NZ32 417 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 GALPQ9UBC7 116 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 MED16Q9Y2X0 877 aa16.03■□□□□ 0.16
CDT1-202ENST00000562747 PIPSLA2A3N6 862 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms