RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 TBC1D21Q8IYX1 336 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 TC2NQ8N9U0 490 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 STYXQ8WUJ0 223 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 PTERQ96BW5 349 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 C5orf34Q96MH7 638 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 TRIM5Q9C035 493 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 IMPACTQ9P2X3 320 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 ERRFI1Q9UJM3 462 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-202ENST00000562722 PLCL2Q9UPR0 1127 aa12.52□□□□□ -0.41
SF3B3-202ENST00000562722 UTP20O75691 2785 aaKnown RBP12.52□□□□□ -0.41
SF3B3-202ENST00000562722 ANKUB1A6NFN9 424 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 OR51F1A6NGY5 319 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 F8W8V4 182 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 CBX6O95503 412 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 METTL18O95568 372 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 AP2A1O95782 977 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 GAS8O95995 478 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 COL8A1P27658 744 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 GLRBP48167 497 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 ITIH4Q14624 930 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 SLC5A12Q1EHB4 618 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 P3H1Q32P28 736 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 CCDC38Q502W7 563 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 IRAK1BP1Q5VVH5 260 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 ZNF787Q6DD87 383 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 PPP1R32Q7Z5V6 425 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 DNAAF3Q8N9W5 541 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 OR5K2Q8NHB8 316 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 DLG3Q92796 817 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 CALR3Q96L12 384 aaKnown RBP12.51□□□□□ -0.41
SF3B3-202ENST00000562722 TTC1Q99614 292 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 ZNF552Q9H707 407 aaPredicted RBP12.51□□□□□ -0.41
SF3B3-202ENST00000562722 ATP13A2Q9NQ11 1180 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 CDC23Q9UJX2 597 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 SLC5A6Q9Y289 635 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 KLHL20Q9Y2M5 609 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 COPG1Q9Y678 874 aaKnown RBP12.51□□□□□ -0.41
SF3B3-202ENST00000562722 SHANK1Q9Y566 2161 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 PCSK5Q92824 1860 aa12.51□□□□□ -0.41
SF3B3-202ENST00000562722 SPTBP11277 2137 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 ESPL1Q14674 2120 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 CCDC162PA2VCL2 907 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 SOWAHDA6NJG2 315 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 PSMD3O43242 534 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 UMODP07911 640 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 ACADLP28330 430 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 GABRA4P48169 554 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 PLOD1Q02809 727 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-202ENST00000562722 KIR2DS3Q14952 304 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 KCTD11Q693B1 232 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 PACS1Q6VY07 963 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 TTLL10Q6ZVT0 673 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 TAX1BP1Q86VP1 789 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 FAM20CQ8IXL6 584 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 TTC13Q8NBP0 860 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 CFAP61Q8NHU2 1237 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 ALG3Q92685 438 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 CHRNA10Q9GZZ6 450 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 AGPAT4Q9NRZ5 378 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 EURLQ9NYK6 297 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.5□□□□□ -0.41
SF3B3-202ENST00000562722 CIDEBQ9UHD4 219 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 FBXL4Q9UKA2 621 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 DUSP10Q9Y6W6 482 aa12.5□□□□□ -0.41
SF3B3-202ENST00000562722 NOTCH2Q04721 2471 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 SLC5A10A0PJK1 596 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 RCCD1A6NED2 376 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 BHMG1C9JSJ3 638 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 H3BMH7 237 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 AGPSO00116 658 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 OR1I1O60431 355 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 CNOT3O75175 753 aaKnown RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 ALOX12BO75342 701 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 CLDN1O95832 211 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 LDLRP01130 860 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 RPN2P04844 631 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 TPBGLP0DKB5 382 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 PIM1P11309 404 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 MAGP20916 626 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 PKLRP30613 574 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 RAB28P51157 221 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 ARSFP54793 590 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 HSPA14Q0VDF9 509 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 AIMP2Q13155 320 aaKnown RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 MRPL14Q6P1L8 145 aaKnown RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 IGFL3Q6UXB1 125 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 PPP1R21Q6ZMI0 780 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 LINC00523Q86TU6 105 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 KLHDC8BQ8IXV7 354 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 DNAJC22Q8N4W6 341 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 C2orf73Q8N5S3 287 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 UBL4BQ8N7F7 174 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 OR52K1Q8NGK4 314 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 FLVCR1-AS1Q8TAF5 88 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 DENND1AQ8TEH3 1009 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 TMEM121Q9BTD3 319 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 TSSK1BQ9BXA7 367 aa12.49□□□□□ -0.41
SF3B3-202ENST00000562722 ZBTB20Q9HC78 741 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-202ENST00000562722 EPN1Q9Y6I3 576 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms