RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MBOAT1Q6ZNC8 495 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 SLCO4C1Q6ZQN7 724 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 C1orf229Q6ZS94 237 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 RNF165Q6ZSG1 346 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ACAD11Q709F0 780 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ERMP1Q7Z2K6 904 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 GOLGA7Q7Z5G4 137 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 RALGPS2Q86X27 583 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 THNSL2Q86YJ6 484 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ZNF547Q8IVP9 402 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ADHFE1Q8IWW8 467 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 C10orf67Q8IYJ2 551 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 LILRA3Q8N6C8 439 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TEX9Q8N6V9 391 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PLA2G15Q8NCC3 412 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 RBM15BQ8NDT2 890 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 OR52B6Q8NGF0 335 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 OR56A4Q8NGH8 313 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 OR2T3Q8NH03 318 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 CEP70Q8NHQ1 597 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TWIST2Q8WVJ9 160 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 DNASE1L2Q92874 299 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ERLEC1Q96DZ1 483 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 DCUN1D1Q96GG9 259 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 LINC00615Q96LM1 132 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PPP1R36Q96LQ0 422 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 LENG8Q96PV6 779 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 MYCBPQ99417 103 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 CCM2Q9BSQ5 444 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 HGH1Q9BTY7 390 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 NUSAP1Q9BXS6 441 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 CD244Q9BZW8 370 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 MKRN2Q9H000 416 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 C1orf21Q9H246 121 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 AKTIPQ9H8T0 292 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 KCNK12Q9HB15 430 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PARVBQ9HBI1 364 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TRIM39Q9HCM9 518 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 MID1IP1Q9NPA3 183 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 SEMA4BQ9NPR2 832 aaPredicted RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 UTP6Q9NYH9 597 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 MCM8Q9UJA3 840 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 CCL27Q9Y4X3 112 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TNPO3Q9Y5L0 923 aaKnown RBP6.38□□□□□ -1.39
CAPN3-210ENST00000561817 PTGDR2Q9Y5Y4 395 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 TRPM6Q9BX84 2022 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 ATG2BQ96BY7 2078 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 DOCK9Q9BZ29 2069 aa6.38□□□□□ -1.39
CAPN3-210ENST00000561817 NUMA1Q14980 2115 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ZFC3H1O60293 1989 aaKnown RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 KCNE1BA0A087WTH5 132 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 IGLON5A6NGN9 336 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PRR19A6NJB7 356 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 OR2AG2A6NM03 316 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 A8MUI8 341 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ARHGEF33A8MVX0 844 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 B2RBV5 119 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 K7EPI3 171 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 QSOX1O00391 747 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 CHUKO15111 745 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 INPP4BO15327 924 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PLRG1O43660 514 aaKnown RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 SNX2O60749 519 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PRAMEF4O60810 478 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 OR4F21O95013 312 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 FTH1P02794 183 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GSTM1P09488 218 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 UROSP10746 265 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 COX4I1P13073 169 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ZNF8P17098 575 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 VCLP18206 1134 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 NCF2P19878 526 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GPX3P22352 226 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 TRIM23P36406 574 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 CPA2P48052 419 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 HSPA7P48741 367 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PPM1FP49593 454 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 HTR6P50406 440 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 RASSF2P50749 326 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 NEK2P51955 445 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 RAP1GDS1P52306 607 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 CTBSQ01459 385 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GSTM4Q03013 218 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PCDH1Q08174 1060 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 HSPA14Q0VDF9 509 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GTF2H2Q13888 395 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GRB7Q14451 532 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PON2Q15165 354 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 E2F5Q15329 346 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PRAMEF9Q5VWM5 478 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 ZNF776Q68DI1 518 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 NXNQ6DKJ4 435 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 OGFOD2Q6N063 350 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 GTF2H2CQ6P1K8 395 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PNCKQ6P2M8 343 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 CYB5D1Q6P9G0 228 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 PGM2L1Q6PCE3 622 aa6.37□□□□□ -1.39
CAPN3-210ENST00000561817 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.37□□□□□ -1.39
CAPN3-210ENST00000561817 Q6ZSR9 355 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms