RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TLCD2A6NGC4 264 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 E5RI56 91 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 F8W8V4 182 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 KIF2AO00139 706 aaPredicted RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 KPNA5O15131 536 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 TOX3O15405 576 aaPredicted RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 PRICKLE3O43900 615 aaPredicted RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 UGT2B7P16662 529 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 WT1P19544 449 aaPredicted RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 MCM3P25205 808 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 ECHS1P30084 290 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 YBX1P67809 324 aaKnown RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 FASTKQ14296 549 aaKnown RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 COL28A1Q2UY09 1125 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 PAQR3Q6TCH7 311 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 TMEM207Q6UWW9 146 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 PIWIL4Q7Z3Z4 852 aaKnown RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 TAX1BP1Q86VP1 789 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 DTX1Q86Y01 620 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 D2HGDHQ8N465 521 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 ZNF248Q8NDW4 579 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 GSDMBQ8TAX9 411 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 PYROXD1Q8WU10 500 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 KCNJ9Q92806 393 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 TRAPPC9Q96Q05 1148 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 OR6C1Q96RD1 312 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 DDA1Q9BW61 102 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 PITPNM3Q9BZ71 974 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 FAM60AQ9NP50 221 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 AKAP7Q9P0M2 348 aaPredicted RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 POLG2Q9UHN1 485 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 RALYQ9UKM9 306 aaKnown RBP13.45□□□□□ -0.26
TPM1-230ENST00000561266 IKZF3Q9UKT9 509 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 VPS9D1Q9Y2B5 631 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 KLHL20Q9Y2M5 609 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 LOC400499M0QZD8 3231 aa13.45□□□□□ -0.26
TPM1-230ENST00000561266 ITPR1Q14643 2758 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 MGAQ8IWI9 3026 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 A0A1W2PPV9 198 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 PIPSLA2A3N6 862 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 CTAGE15A4D2H0 777 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 PFDN6O15212 129 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 EIF3HO15372 352 aaKnown RBP eCLIP13.44□□□□□ -0.26
TPM1-230ENST00000561266 KLK10O43240 276 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 PSIP1O75475 530 aaKnown RBP13.44□□□□□ -0.26
TPM1-230ENST00000561266 TUBB4AP04350 444 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 CTSBP07858 339 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 CTAGE8P0CG41 777 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 CDH3P22223 829 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 ATP5DP30049 168 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 SHMT2P34897 504 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 MAGEA4P43358 317 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 TLE3Q04726 772 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 FOXM1Q08050 763 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 MGAT5Q09328 741 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 GPR19Q15760 415 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 HECTD2Q5U5R9 776 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 PRAMEF17Q5VTA0 474 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 ARMC6Q6NXE6 501 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 KLHL35Q6PF15 583 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 SPESP1Q6UW49 350 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 KIAA0408Q6ZU52 694 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 GALNT7Q86SF2 657 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 CTAGE6Q86UF2 777 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 ZC3HC1Q86WB0 502 aaKnown RBP13.44□□□□□ -0.26
TPM1-230ENST00000561266 DCUN1D3Q8IWE4 304 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 CTAGE4Q8IX94 777 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 EEF1AKMT1Q8WVE0 214 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
TPM1-230ENST00000561266 KCNE4Q8WWG9 221 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 UBXN4Q92575 508 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 INPP5DQ92835 1189 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 CD180Q99467 661 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 LRRC4CQ9HCJ2 640 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 ADAMTS6Q9UKP5 1117 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 SEC16AO15027 2179 aa13.44□□□□□ -0.26
TPM1-230ENST00000561266 NBEAQ8NFP9 2946 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 TCRBV9S1A1TA0A576 114 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 C2orf74A8MZ97 194 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 RASGRF2O14827 1237 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 NRP2O60462 931 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 FAM155BO75949 473 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 TSPAN12O95859 305 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 CD9P21926 228 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 FDXRP22570 491 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 PSMB5P28074 263 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 GMPRP36959 345 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 RAB28P51157 221 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 PRKAA1Q13131 559 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 EFTUD2Q15029 972 aaKnown RBP eCLIP13.43□□□□□ -0.261e-5■■■□□ 16.7
TPM1-230ENST00000561266 DCAF12Q5T6F0 453 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 STRA8Q7Z7C7 330 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 VASH2Q86V25 355 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 PALM2Q8IXS6 379 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 GPATCH11Q8N954 259 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 OR2L8Q8NGY9 312 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 ASB11Q8WXH4 323 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 NKD1Q969G9 470 aa13.43□□□□□ -0.26
TPM1-230ENST00000561266 ZNF501Q96CX3 271 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms