RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 CSHL1Q14406 222 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 PPP1R3AQ16821 1122 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 MBOAT1Q6ZNC8 495 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 RBM44Q6ZP01 1051 aaKnown RBP21.11■□□□□ 0.97
SNX1-210ENST00000560260 TDRPQ86YL5 185 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 KCTD4Q8WVF5 259 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 PTERQ96BW5 349 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 CCDC77Q9BR77 488 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 SEMA6CQ9H3T2 930 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 SPHK1Q9NYA1 384 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 TBK1Q9UHD2 729 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 WASF3Q9UPY6 502 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 PLAAQ9Y263 795 aa21.11■□□□□ 0.97
SNX1-210ENST00000560260 A0A096LPK6 155 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 FAM149AA5PLN7 773 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 FOXO6A8MYZ6 492 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 SLC16A5O15375 505 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 HYAL3O43820 417 aaPredicted RBP21.1■□□□□ 0.97
SNX1-210ENST00000560260 ZBTB14O43829 449 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 RFPL1O75677 317 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 KRT37O76014 449 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 ERGP11308 486 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 TYK2P29597 1187 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 SHMT2P34897 504 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 RAB28P51157 221 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 FOXC1Q12948 553 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 TSNQ15631 228 aaKnown RBP21.1■□□□□ 0.97
SNX1-210ENST00000560260 BEND6Q5SZJ8 279 aaPredicted RBP21.1■□□□□ 0.97
SNX1-210ENST00000560260 OOSP2Q86WS3 158 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 CYP4X1Q8N118 509 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 C2orf73Q8N5S3 287 aaPredicted RBP21.1■□□□□ 0.97
SNX1-210ENST00000560260 DCBLD1Q8N8Z6 715 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 OR9A1PQ8NGU1 263 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 PPM1MQ96MI6 270 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 HRASLS2Q9NWW9 162 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 SPATA7Q9P0W8 599 aa21.1■□□□□ 0.97
SNX1-210ENST00000560260 IGHV5-10-1A0A0J9YXX1 117 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 CAPN5O15484 640 aaPredicted RBP21.09■□□□□ 0.97
SNX1-210ENST00000560260 ZW10O43264 779 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 C9P02748 559 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 THRAP10827 490 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 ZFP36L1Q07352 338 aaKnown RBP21.09■□□□□ 0.97
SNX1-210ENST00000560260 FASTKQ14296 549 aaKnown RBP21.09■□□□□ 0.97
SNX1-210ENST00000560260 OR4D1Q15615 310 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 CLPPQ16740 277 aaPredicted RBP21.09■□□□□ 0.97
SNX1-210ENST00000560260 TMEM71Q6P5X7 295 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 TTC23LQ6PF05 361 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 WDR74Q6RFH5 385 aaPredicted RBP21.09■□□□□ 0.97
SNX1-210ENST00000560260 TIFABQ6ZNK6 161 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 TMPRSS7Q7RTY8 843 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 TAX1BP1Q86VP1 789 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 PLD6Q8N2A8 252 aaKnown RBP21.09■□□□□ 0.97
SNX1-210ENST00000560260 OR2L8Q8NGY9 312 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 FLVCR1-AS1Q8TAF5 88 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 MAGEC3Q8TD91 643 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 NXNL1Q96CM4 212 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 CCDC74BQ96LY2 380 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 TGM7Q96PF1 710 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 RAB33BQ9H082 229 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 ZMYND15Q9H091 742 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 PDP2Q9P2J9 529 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 EPHA6Q9UF33 1036 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 CLCA2Q9UQC9 943 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 ENTPD2Q9Y5L3 495 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 CACNA1AO00555 2505 aa21.09■□□□□ 0.97
SNX1-210ENST00000560260 A0A087X1B8 175 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 KIF1CO43896 1103 aaKnown RBP21.08■□□□□ 0.97
SNX1-210ENST00000560260 CSO75390 466 aaKnown RBP21.08■□□□□ 0.97
SNX1-210ENST00000560260 SLC16A8O95907 504 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 SYF2O95926 243 aaKnown RBP21.08■□□□□ 0.97
SNX1-210ENST00000560260 CHRM5P08912 532 aaPredicted RBP21.08■□□□□ 0.97
SNX1-210ENST00000560260 CYP2A7P20853 494 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 IMPA1P29218 277 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 KPNA2P52292 529 aaKnown RBP21.08■□□□□ 0.97
SNX1-210ENST00000560260 RASA2Q15283 850 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 CYP2A13Q16696 494 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 ISXQ2M1V0 245 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 TAF1BQ53T94 588 aaPredicted RBP21.08■□□□□ 0.97
SNX1-210ENST00000560260 IRGCQ6NXR0 463 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 TMPRSS12Q86WS5 348 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 OR4D9Q8NGE8 314 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 ANKRD7Q92527 254 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 MTBPQ96DY7 904 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 VPS11Q9H270 941 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 PPCSQ9HAB8 311 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 PARVBQ9HBI1 364 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 OR6C2Q9NZP2 312 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 KLHL3Q9UH77 587 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 POMT2Q9UKY4 750 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 ACOT9Q9Y305 439 aa21.08■□□□□ 0.97
SNX1-210ENST00000560260 IQANK1A0A1B0GTG1 560 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 A0A1W2PPV9 198 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 ERLIN1O75477 346 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 LTA4HP09960 611 aaKnown RBP21.07■□□□□ 0.96
SNX1-210ENST00000560260 SPINK2P20155 84 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 MAP4P27816 1152 aaKnown RBP21.07■□□□□ 0.96
SNX1-210ENST00000560260 LSSP48449 732 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 INHBCP55103 352 aa21.07■□□□□ 0.96
SNX1-210ENST00000560260 TARDBPQ13148 414 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNX1-210ENST00000560260 ZXDCQ2QGD7 858 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms