RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 KCNK13Q9HB14 408 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 TM9SF3Q9HD45 589 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 STOX2Q9P2F5 926 aaPredicted RBP10.92□□□□□ -0.66
USP3-218ENST00000560202 OPTCQ9UBM4 332 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 CIDEBQ9UHD4 219 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 ARL2BPQ9Y2Y0 163 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 USH1CQ9Y6N9 552 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 ANKRD33BA6NCL7 494 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 PDZK1P1A8MUH7 402 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 SLCO1B7G3V0H7 640 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 TLR4O00206 839 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 SLC16A8O95907 504 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 RPN2P04844 631 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 AK4P27144 223 aaPredicted RBP10.92□□□□□ -0.66
USP3-218ENST00000560202 SLC6A12P48065 614 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 HK2P52789 917 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 ARFIP2P53365 341 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 AQP5P55064 265 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 RBBP7Q16576 425 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 PTCHD3Q3KNS1 767 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 UAP1L1Q3KQV9 507 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 ZNF542PQ5EBM4 170 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 WDR45BQ5MNZ6 344 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 AGTRAPQ6RW13 159 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 LAYNQ6UX15 382 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 ARMCX6Q7L4S7 300 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 LPCAT2Q7L5N7 544 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 PARGQ86W56 976 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 DCUN1D3Q8IWE4 304 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 DTWD2Q8NBA8 298 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 OR5K2Q8NHB8 316 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 CCL4L1Q8NHW4 92 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 C10orf82Q8WW14 230 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 CCT6BQ92526 530 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 RAD51AP1Q96B01 352 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 C12orf66Q96MD2 445 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 TMEM120AQ9BXJ8 343 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 ATG10Q9H0Y0 220 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 TRIT1Q9H3H1 467 aaKnown RBP10.92□□□□□ -0.66
USP3-218ENST00000560202 SLC32A1Q9H598 525 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 TNFRSF12AQ9NP84 129 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 MID1IP1Q9NPA3 183 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 PRDM8Q9NQV8 689 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 KCNK4Q9NYG8 393 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 TBC1D29Q9UFV1 150 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 KLF15Q9UIH9 416 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 ANGPTL3Q9Y5C1 460 aa10.92□□□□□ -0.66
USP3-218ENST00000560202 CFAP20Q9Y6A4 193 aaKnown RBP10.92□□□□□ -0.66
USP3-218ENST00000560202 TECTAO75443 2155 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 TMEM233B4DJY2 109 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 MATN2O00339 956 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ZNF195O14628 629 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 FGF4P08620 206 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ALOX15P16050 662 aaPredicted RBP10.91□□□□□ -0.66
USP3-218ENST00000560202 EPB42P16452 691 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 IMPA1P29218 277 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ACTR1BP42025 376 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 PIK3CGP48736 1102 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 BLKP51451 505 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ACTR1AP61163 376 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ILF3Q12906 894 aaKnown RBP eCLIP10.91□□□□□ -0.66
USP3-218ENST00000560202 GRB7Q14451 532 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 CLCA4Q14CN2 919 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 TCEA2Q15560 299 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 DUS1LQ6P1R4 473 aaKnown RBP10.91□□□□□ -0.66
USP3-218ENST00000560202 SLC30A9Q6PML9 568 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ABRAXAS1Q6UWZ7 409 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 WASH2PQ6VEQ5 465 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 LRRC70Q7Z2Q7 622 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 MAVSQ7Z434 540 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 C11orf74Q86VG3 221 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 NRROSQ86YC3 692 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 TBC1D21Q8IYX1 336 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 PHACTR4Q8IZ21 702 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 KIRREL3Q8IZU9 778 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 GBP7Q8N8V2 638 aaPredicted RBP10.91□□□□□ -0.66
USP3-218ENST00000560202 AGAP11Q8TF27 550 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ZNF480Q8WV37 535 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 PYCR2Q96C36 320 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 FERD3LQ96RJ6 166 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 ZNF382Q96SR6 550 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 TCEAL2Q9H3H9 227 aaPredicted RBP10.91□□□□□ -0.66
USP3-218ENST00000560202 NOL11Q9H8H0 719 aaKnown RBP10.91□□□□□ -0.66
USP3-218ENST00000560202 IPPKQ9H8X2 491 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 WASH6PQ9NQA3 447 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 IMP3Q9NV31 184 aaKnown RBP10.91□□□□□ -0.66
USP3-218ENST00000560202 VTI1BQ9UEU0 232 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 TDRKHQ9Y2W6 561 aaKnown RBP10.91□□□□□ -0.66
USP3-218ENST00000560202 TRAF6Q9Y4K3 522 aa10.91□□□□□ -0.66
USP3-218ENST00000560202 A0A1B0GTL3 188 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 OR52A4PA6NMU1 304 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 OR7A17O14581 309 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 HDAC3O15379 428 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 WDR47O94967 919 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 ATP6V1G2O95670 118 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 ESRRBO95718 433 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 PRDX3P30048 256 aaKnown RBP10.9□□□□□ -0.66
USP3-218ENST00000560202 HALP42357 657 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 PKNOX1P55347 436 aa10.9□□□□□ -0.66
USP3-218ENST00000560202 PRKG2Q13237 762 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms