RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 LIN7AO14910 233 aaPredicted RBP16.13■□□□□ 0.17
TPM1-219ENST00000559397 SDC3O75056 442 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 LRP3O75074 770 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 SLCO2B1O94956 709 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 VCLP18206 1134 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 ARRB1P49407 418 aaPredicted RBP16.13■□□□□ 0.17
TPM1-219ENST00000559397 IDH3AP50213 366 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 ILF3Q12906 894 aaKnown RBP eCLIP16.13■□□□□ 0.17
TPM1-219ENST00000559397 BOP1Q14137 746 aaKnown RBP16.13■□□□□ 0.17
TPM1-219ENST00000559397 PFKFB4Q16877 469 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 PLEKHS1Q5SXH7 462 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 EPGNQ6UW88 154 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 SBSNQ6UWP8 590 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 KANSL1Q7Z3B3 1105 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 RAB44Q7Z6P3 723 aaPredicted RBP16.13■□□□□ 0.17
TPM1-219ENST00000559397 CLNKQ7Z7G1 428 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 VRK3Q8IV63 474 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 FBXO39Q8N4B4 442 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 OR2I1PQ8NGU4 316 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 LMX1AQ8TE12 382 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 ASZ1Q8WWH4 475 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 EXT2Q93063 718 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 EBF4Q9BQW3 602 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 GSDMCQ9BYG8 508 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 UCKL1Q9NWZ5 548 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 FAM8A1Q9UBU6 413 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 VTI1BQ9UEU0 232 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 RRP15Q9Y3B9 282 aaKnown RBP16.13■□□□□ 0.17
TPM1-219ENST00000559397 OTOGLQ3ZCN5 2332 aa16.13■□□□□ 0.17
TPM1-219ENST00000559397 SUPT3HB4E1H0 165 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 ANKRD65E5RJM6 399 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 HDAC3O15379 428 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 AQP9O43315 295 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 SUPT3HO75486 399 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 CER1O95813 267 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 ENO3P13929 434 aaPredicted RBP16.12■□□□□ 0.17
TPM1-219ENST00000559397 GFAPP14136 432 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 TGM1P22735 817 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 EPHA8P29322 1005 aaPredicted RBP16.12■□□□□ 0.17
TPM1-219ENST00000559397 ACTR1BP42025 376 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 PREPP48147 710 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 CORO7P57737 925 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 ACTR1AP61163 376 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 NAA20P61599 178 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 HSPA14Q0VDF9 509 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 RPA4Q13156 261 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 ELOCQ15369 112 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 SF3A2Q15428 464 aaKnown RBP16.12■□□□□ 0.17
TPM1-219ENST00000559397 PPP1R3AQ16821 1122 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 SLC30A9Q6PML9 568 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 MYO1HQ8N1T3 1032 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 SDR16C5Q8N3Y7 309 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 SLC25A45Q8N413 288 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 PHOX2BQ99453 314 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 DPEP2Q9H4A9 486 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 ACTR5Q9H9F9 607 aaPredicted RBP16.12■□□□□ 0.17
TPM1-219ENST00000559397 EML4Q9HC35 981 aaKnown RBP16.12■□□□□ 0.17
TPM1-219ENST00000559397 PARD6AQ9NPB6 346 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 SEMA4GQ9NTN9 838 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 NUDT4Q9NZJ9 180 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 NCDNQ9UBB6 729 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 TBC1D29Q9UFV1 150 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 ZFP69BQ9UJL9 534 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 ACSL5Q9ULC5 683 aa16.12■□□□□ 0.17
TPM1-219ENST00000559397 A6NCN8 305 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 HGSO14964 777 aaPredicted RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 EML2O95834 649 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 PDHA2P29803 388 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 SCTRP47872 440 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 ALDH18A1P54886 795 aaKnown RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 NHLH1Q02575 133 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 PLOD1Q02809 727 aaPredicted RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 TGFBIQ15582 683 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 CSRP2Q16527 193 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 SYTL3Q4VX76 610 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 TAF8Q7Z7C8 310 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 ALYREFQ86V81 257 aaKnown RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 SLC22A15Q8IZD6 547 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 MAPK15Q8TD08 544 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 SAP25Q8TEE9 199 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 GLMNQ92990 594 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 TMEM159Q96B96 161 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 GTPBP2Q9BX10 602 aaKnown RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 OR52A5Q9H2C5 316 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 OSGEPL1Q9H4B0 414 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 TAAR2Q9P1P5 351 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 PCOLCE2Q9UKZ9 415 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 APOBEC2Q9Y235 224 aaKnown RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 CSNK1G3Q9Y6M4 447 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 ARHGEF17Q96PE2 2063 aaPredicted RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 CABIN1Q9Y6J0 2220 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 LMO7DNF2Z398 122 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 FCHO1O14526 889 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 YY2O15391 372 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 YKT6O15498 198 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 SUPT7LO94864 414 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 SIX3O95343 332 aaPredicted RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 RPS17P08708 135 aaKnown RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 GIMD1P0DJR0 217 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 IDSP22304 550 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms