RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ANKRD20A4Q4UJ75 823 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 DNAJC21Q5F1R6 531 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 CYB5D1Q6P9G0 228 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 SDCCAG8Q86SQ7 713 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 AGGF1Q8N302 714 aaeCLIP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 C19orf47Q8N9M1 422 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 LINC01555Q8NAE3 123 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 FLVCR1-AS1Q8TAF5 88 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 GSDMBQ8TAX9 411 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 TSSK1BQ9BXA7 367 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 PITPNM3Q9BZ71 974 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 DDX47Q9H0S4 455 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 ACTR5Q9H9F9 607 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 FANCEQ9HB96 536 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 FBXO6Q9NRD1 293 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 STARD5Q9NSY2 213 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 GEMIN8Q9NWZ8 242 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 SAMD15Q9P1V8 674 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 POLG2Q9UHN1 485 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 SERTAD3Q9UJW9 196 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 FARSAQ9Y285 508 aaKnown RBP12.09□□□□□ -0.47
SMAD3-208ENST00000558827 MAD1L1Q9Y6D9 718 aa12.09□□□□□ -0.47
SMAD3-208ENST00000558827 NBASA2RRP1 2371 aa12.08□□□□□ -0.47
SMAD3-208ENST00000558827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 A0A0J9YY10 115 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 CTAGE9A4FU28 777 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 SDR42E2A6NKP2 422 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 J3QKU1 62 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 MEN1O00255 615 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 MATN2O00339 956 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 ZNF749O43361 778 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 PHF2O75151 1096 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 DNAJB5O75953 348 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 CBSLP0DN79 551 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 PKLRP30613 574 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 CBSP35520 551 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 ITGA1P56199 1179 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 RPS15P62841 145 aaKnown RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 CDK16Q00536 496 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 PLOD1Q02809 727 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 TSTA3Q13630 321 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 IL10RAQ13651 578 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 GRB7Q14451 532 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 PPP1R7Q15435 360 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 KYNUQ16719 465 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 ACSBG2Q5FVE4 666 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 HP1BP3Q5SSJ5 553 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 MRNIPQ6NTE8 343 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 NEPROQ6NW34 567 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 CENPUQ71F23 418 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 OTOAQ7RTW8 1153 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 TMEM151BQ8IW70 566 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 DENND6AQ8IWF6 608 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 ZNF655Q8N720 491 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 ENDOVQ8N8Q3 282 aaKnown RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 APOBEC4Q8WW27 367 aaKnown RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 LPGAT1Q92604 370 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 PEX13Q92968 403 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 ABHD17AQ96GS6 310 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 SGSM3Q96HU1 749 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 BIRC8Q96P09 236 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 CATSPER2Q96P56 530 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 SERPINB12Q96P63 405 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 FCRL4Q96PJ5 515 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 SLC25A18Q9H1K4 315 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 MRM3Q9HC36 420 aaKnown RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 ABCF3Q9NUQ8 709 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 PCMTD2Q9NV79 361 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.08□□□□□ -0.48
SMAD3-208ENST00000558827 KCND3Q9UK17 655 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 SLC39A10Q9ULF5 831 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 PYCARDQ9ULZ3 195 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 SNX12Q9UMY4 172 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 NEU2Q9Y3R4 380 aa12.08□□□□□ -0.48
SMAD3-208ENST00000558827 TNRC6AQ8NDV7 1962 aaKnown RBP12.07□□□□□ -0.48
SMAD3-208ENST00000558827 E7EQ34 232 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 AP3B1O00203 1094 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 OR2B3O76000 313 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 SLCO2B1O94956 709 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 MAGP20916 626 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 CD9P21926 228 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 PSMB5P28074 263 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 PTPN4P29074 926 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 MAGEA6P43360 314 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 RAB28P51157 221 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 GNG11P61952 73 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 YBX1P67809 324 aaKnown RBP12.07□□□□□ -0.48
SMAD3-208ENST00000558827 CUL1Q13616 776 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
SMAD3-208ENST00000558827 CYP1B1Q16678 543 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 MLIPQ5VWP3 458 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 CPZQ66K79 652 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 ZNF470Q6ECI4 717 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 KIAA0930Q6ICG6 404 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-208ENST00000558827 KLHL7Q8IXQ5 586 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 SYTL1Q8IYJ3 562 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 DSELQ8IZU8 1212 aa12.07□□□□□ -0.48
SMAD3-208ENST00000558827 ACTRT1Q8TDG2 376 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms