RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ZNF248Q8NDW4 579 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 GSDMBQ8TAX9 411 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 KCNE4Q8WWG9 221 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 INPP5DQ92835 1189 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 SLC41A2Q96JW4 573 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 OR2A14Q96R47 310 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 OR6C1Q96RD1 312 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 MENTQ9BUN1 341 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 MOCS1Q9NZB8 636 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 SEMA5BQ9P283 1151 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 POLG2Q9UHN1 485 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 POMT2Q9UKY4 750 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 KLHL20Q9Y2M5 609 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 DHRS7Q9Y394 339 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 A0A087WV48 116 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 TEX51A0A1B0GUA7 166 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 PIPSLA2A3N6 862 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 ISM1B1AKI9 464 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 POLR1CO15160 346 aaPredicted RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 TOX3O15405 576 aaPredicted RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 RRP8O43159 456 aaKnown RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 MATN4O95460 622 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CHRM5P08912 532 aaPredicted RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 UGT2B7P16662 529 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 ZNF28P17035 718 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 MLLT3P42568 568 aaPredicted RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 MGAT5Q09328 741 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CBLBQ13191 982 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 GPR19Q15760 415 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 DCAF12Q5T6F0 453 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 UBAP2Q5T6F2 1119 aaKnown RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 TMEM164Q5U3C3 297 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 UNC5DQ6UXZ4 953 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 LRRC69Q6ZNQ3 347 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 PIWIL4Q7Z3Z4 852 aaKnown RBP13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 GPATCH11Q8N954 259 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 LRRN4CLQ8ND94 238 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 FLVCR1-AS1Q8TAF5 88 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 CD200R1Q8TD46 325 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 KCNJ9Q92806 393 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 FBXO8Q9NRD0 319 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 ZDHHC18Q9NUE0 388 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 PCDHGA3Q9Y5H0 932 aa13.39□□□□□ -0.27
TSPAN3-205ENST00000558745 SDK2Q58EX2 2172 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 TLCD2A6NGC4 264 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 ARHGEF33A8MVX0 844 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 C2orf74A8MZ97 194 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 NDC80O14777 642 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 VPS26AO75436 327 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 TIAF1O95411 115 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 SAT1P21673 171 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 PKLRP30613 574 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 SHMT2P34897 504 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 MAGEA4P43358 317 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 ARL4DP49703 201 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 FASTKQ14296 549 aaKnown RBP13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 ZIC1Q15915 447 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 HECTD2Q5U5R9 776 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 PRAMEF17Q5VTA0 474 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 PAQR3Q6TCH7 311 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 C3orf62Q6ZUJ4 267 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 TIPARPQ7Z3E1 657 aaKnown RBP13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 STRA8Q7Z7C7 330 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 VASH2Q86V25 355 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 DCUN1D3Q8IWE4 304 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 DENND1AQ8TEH3 1009 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 EEF1AKMT1Q8WVE0 214 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 IFT81Q8WYA0 676 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 UBXN4Q92575 508 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 TRAPPC9Q96Q05 1148 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 OLFM1Q99784 485 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 SPRY4Q9C004 299 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 SOHLH2Q9NX45 425 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 SLC39A10Q9ULF5 831 aa13.38□□□□□ -0.27
TSPAN3-205ENST00000558745 EIF3HO15372 352 aaKnown RBP eCLIP13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 EFSO43281 561 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 HCRTR1O43613 425 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 ZBTB11O95625 1053 aaPredicted RBP13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 CTSBP07858 339 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 SPTBP11277 2137 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 CD9P21926 228 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 RAB28P51157 221 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 YBX1P67809 324 aaKnown RBP13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 HSD11B2P80365 405 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 CAV1Q03135 178 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 TLE3Q04726 772 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 FRG1Q14331 258 aaKnown RBP13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 SPESP1Q6UW49 350 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 CEACAM20Q6UY09 585 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 KIAA0408Q6ZU52 694 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 DTX1Q86Y01 620 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 D2HGDHQ8N465 521 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 MNS1Q8NEH6 495 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 SEC14L1Q92503 715 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 RAD51AP1Q96B01 352 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 FOPNLQ96NB1 174 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 CD180Q99467 661 aa13.37□□□□□ -0.27
TSPAN3-205ENST00000558745 PKP4Q99569 1192 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms