RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 TRAF3Q13114 568 aa15.13■□□□□ 0.01
AP4E1-202ENST00000558439 ATP6AP1Q15904 470 aa15.13■□□□□ 0.01
AP4E1-202ENST00000558439 RFX4Q33E94 735 aa15.13■□□□□ 0.01
AP4E1-202ENST00000558439 TSPAN33Q86UF1 283 aa15.13■□□□□ 0.01
AP4E1-202ENST00000558439 TFAP2CQ92754 450 aa15.13■□□□□ 0.01
AP4E1-202ENST00000558439 SCAMP4Q969E2 229 aa15.13■□□□□ 0.01
AP4E1-202ENST00000558439 A0A1B0GTL3 188 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 CLIC1O00299 241 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 VILLO15195 856 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 MMP2P08253 660 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 PCSK6P29122 969 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 IFNA8P32881 189 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 DGKEP52429 567 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 MANEALQ5VSG8 457 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 KIAA2013Q8IYS2 634 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 SLC22A15Q8IZD6 547 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 TTC29Q8NA56 475 aaPredicted RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 ZIC5Q96T25 663 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 ANKRD60Q9BZ19 345 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 SLC32A1Q9H598 525 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 EPS8L2Q9H6S3 715 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 AASDHPPTQ9NRN7 309 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 ARMC1Q9NVT9 282 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 TRNAU1APQ9NX07 287 aaKnown RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 CNOT11Q9UKZ1 510 aaKnown RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 TSC22D4Q9Y3Q8 395 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 ANKDD1BA6NHY2 528 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 MAGEB17A8MXT2 336 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 SMAD6O43541 496 aaKnown RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 FAM189BP81408 668 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 RUNX1T1Q06455 604 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 BHLHA9Q7RTU4 235 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 ZFAND4Q86XD8 727 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 CHERPQ8IWX8 916 aaKnown RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 ADGRG2Q8IZP9 1017 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 OR4A15Q8NGL6 344 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 SMAD5Q99717 465 aaKnown RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 SUV39H2Q9H5I1 410 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 VAPAQ9P0L0 249 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 DRGXA6NNA5 263 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 B4GALT3O60512 393 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 MATN4O95460 622 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 FABP3P05413 133 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 MTHFD2P13995 350 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 ENGP17813 658 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 HOXD9P28356 352 aaPredicted RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 NOGQ13253 232 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 SYT16Q17RD7 645 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 USP39Q53GS9 565 aaKnown RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 RAET1GQ6H3X3 334 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 OR8H2Q8N162 312 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 SCML4Q8N228 414 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 BEND7Q8N7W2 519 aaPredicted RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 OR2AP1Q8NGE2 309 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 C2orf15Q8WU43 125 aaKnown RBP15.12■□□□□ 0.01
AP4E1-202ENST00000558439 CRISPLD1Q9H336 500 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 MAP4K5Q9Y4K4 846 aa15.12■□□□□ 0.01
AP4E1-202ENST00000558439 NDUFS2O75306 463 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 PGLSO95336 258 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 ELFN1P0C7U0 828 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 SMIM18P0DKX4 95 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 HTR1EP28566 365 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 CNTN1Q12860 1018 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 TSEN34Q9BSV6 310 aaKnown RBP15.11■□□□□ 0.01
AP4E1-202ENST00000558439 TRIP12Q14669 1992 aaPredicted RBP15.11■□□□□ 0.01
AP4E1-202ENST00000558439 KPNA5O15131 536 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 PCDH8O95206 1070 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 RPS17P08708 135 aaKnown RBP15.11■□□□□ 0.01
AP4E1-202ENST00000558439 PRPS2P11908 318 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 BCKDHAP12694 445 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 HOXC13P31276 330 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 ZNF140P52738 457 aaPredicted RBP15.11■□□□□ 0.01
AP4E1-202ENST00000558439 TXNL4AP83876 142 aaKnown RBP15.11■□□□□ 0.01
AP4E1-202ENST00000558439 OTOP2Q7RTS6 562 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 ZNF554Q86TJ5 538 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 RTN4RL1Q86UN2 441 aaPredicted RBP15.11■□□□□ 0.01
AP4E1-202ENST00000558439 TMEM151AQ8N4L1 468 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 OR5K1Q8NHB7 308 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 PROKR1Q8TCW9 393 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 ACDQ96AP0 544 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 LOC100130705A0A1B0GUX0 176 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 SEPHS1P49903 392 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 RCAN2Q14206 197 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 HMBOX1Q6NT76 420 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 GPR150Q8NGU9 434 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 TSPEARQ8WU66 669 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 ATL1Q8WXF7 558 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 MYOCQ99972 504 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 RNF38Q9H0F5 515 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 SDK1Q7Z5N4 2213 aa15.11■□□□□ 0.01
AP4E1-202ENST00000558439 ERN1O75460 977 aaKnown RBP15.1■□□□□ 0.01
AP4E1-202ENST00000558439 IGLV3-25P01717 112 aa15.1■□□□□ 0.01
AP4E1-202ENST00000558439 HMGCLP35914 325 aa15.1■□□□□ 0.01
AP4E1-202ENST00000558439 SELPLGQ14242 412 aa15.1■□□□□ 0.01
AP4E1-202ENST00000558439 HKDC1Q2TB90 917 aa15.1■□□□□ 0.01
AP4E1-202ENST00000558439 ZNF648Q5T619 568 aaPredicted RBP15.1■□□□□ 0.01
AP4E1-202ENST00000558439 CFAP206Q8IYR0 622 aa15.1■□□□□ 0.01
AP4E1-202ENST00000558439 NXPE1Q8N323 547 aa15.1■□□□□ 0.01
AP4E1-202ENST00000558439 CNIH3Q8TBE1 160 aa15.1■□□□□ 0.01
AP4E1-202ENST00000558439 REXO4Q9GZR2 422 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms