RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 DRICH1Q6PGQ1 229 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 LIX1Q8N485 282 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PARP16Q8N5Y8 322 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PNLDC1Q8NA58 520 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TEX19Q8NA77 164 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CDCA7Q9BWT1 371 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TTLL2Q9BWV7 592 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 AAASQ9NRG9 546 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 C1orf109Q9NX04 203 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 FANCGO15287 622 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 FABP7O15540 132 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ITPKAP23677 461 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CATSPEREQ5SY80 951 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ATP6V0D2Q8N8Y2 350 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 NAA50Q9GZZ1 169 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ATP13A3Q9H7F0 1226 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SLC38A7Q9NVC3 462 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GPR83Q9NYM4 423 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 KIAA1522Q9P206 1035 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TESMINQ9Y4I5 508 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 RASGRP1O95267 797 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CYP2A7P20853 494 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GSK3BP49841 420 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 LIMK2P53671 638 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TGM3Q08188 693 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SNAPC2Q13487 334 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CNIH3Q8TBE1 160 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SCGB1C1Q8TD33 95 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 C8orf48Q96LL4 319 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 FERD3LQ96RJ6 166 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TMED9Q9BVK6 235 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TCAF1Q9Y4C2 921 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 AQRO60306 1485 aaKnown RBP eCLIP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 DBPQ10586 325 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GRB7Q14451 532 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 HHIPL2Q6UWX4 724 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 AP1S3Q96PC3 154 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 EIF5A2Q9GZV4 153 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ERN1O75460 977 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TRBC1P01850 177 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SSTR2P30874 369 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 EPHX2P34913 555 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SLC26A2P50443 739 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GPR85P60893 370 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SGCGQ13326 291 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ELP2Q6IA86 826 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 C1orf94Q6P1W5 598 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 FAM198BQ6UWH4 519 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF34Q8IZ26 560 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SLC28A3Q9HAS3 691 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PRDM9Q9NQV7 894 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ZNF639Q9UID6 485 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 C2orf92A0A1B0GVN3 265 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TULP3O75386 442 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 MAGEA6P43360 314 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 KLF1Q13351 362 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GGHQ92820 318 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 WNT8BQ93098 351 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PRR11Q96HE9 360 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 HSPA12BQ96MM6 686 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SECISBP2Q96T21 854 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ARL6Q9H0F7 186 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ATG4BQ9Y4P1 393 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TRBC2A0A5B9 178 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ARVCFO00192 962 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 DUSP4Q13115 394 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 DSG2Q14126 1118 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SPHARQ15513 63 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SAMD12Q8N8I0 201 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SLC5A11Q8WWX8 675 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 RPRD1AQ96P16 312 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 NOX3Q9HBY0 568 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TRIOBPQ9H2D6 2365 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CD48P09326 243 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 RNF144AP50876 292 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PON3Q15166 354 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 RELL1Q8IUW5 271 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 PSD2Q9BQI7 771 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 BCL2L14Q9BZR8 327 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TFB2MQ9H5Q4 396 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 MOCS1Q9NZB8 636 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 RHCGQ9UBD6 479 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GPN3Q9UHW5 284 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 C19orf81C9J6K1 198 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 BMP4P12644 408 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CERS1P27544 350 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TNFRSF17Q02223 184 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 GALNT1Q10472 559 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 MTAPQ13126 283 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TTLL9Q3SXZ7 439 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ZIC5Q96T25 663 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 HRH4Q9H3N8 390 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 ARFIP1P53367 373 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 TXNL4AP83876 142 aaKnown RBP3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SEC23BQ15437 767 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 SMARCD3Q6STE5 483 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 COPZ2Q9P299 210 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 OPTCQ9UBM4 332 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 HRGP04196 525 aa3.62□□□□□ -1.83
ATXN3-248ENST00000558190 CLUP10909 449 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms