RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 GSDMBQ8TAX9 411 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 PROKR1Q8TCW9 393 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 ASZ1Q8WWH4 475 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 PEX13Q92968 403 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 ZNF778Q96MU6 729 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 CATSPERZQ9NTU4 200 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 TXLNGQ9NUQ3 528 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 PCDHGB7Q9Y5F8 929 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 SPTBP11277 2137 aa14.12□□□□□ -0.15
SHMT2-235ENST00000557740 A6NL46 340 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 ZNF185O15231 689 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 DPM1O60762 260 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 VPS4BO75351 444 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 CEACAM4O75871 244 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 TPBGLP0DKB5 382 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 CBSLP0DN79 551 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 ETS1P14921 441 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 OTX2P32243 289 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 CCR7P32248 378 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 CBSP35520 551 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 FOLR3P41439 243 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 GABRA4P48169 554 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 RAB28P51157 221 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 DCDP81605 110 aaKnown RBP14.11□□□□□ -0.15
SHMT2-235ENST00000557740 NADK2Q4G0N4 442 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 MLIPQ5VWP3 458 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 ZNF385CQ66K41 422 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-235ENST00000557740 RHBDD2Q6NTF9 364 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 TLDC1Q6P9B6 456 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 MRGPREQ86SM8 312 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 DCUN1D3Q8IWE4 304 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 ZBTB2Q8N680 514 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 ZNF655Q8N720 491 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-235ENST00000557740 CFAP61Q8NHU2 1237 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 FLVCR1-AS1Q8TAF5 88 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 CPT1CQ8TCG5 803 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 LKAAEAR1Q8TD35 194 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 SGSM3Q96HU1 749 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 IP6K3Q96PC2 410 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 AP1M1Q9BXS5 423 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 SPRTNQ9H040 489 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-235ENST00000557740 MLXIPLQ9NP71 852 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 EIF2B3Q9NR50 452 aaKnown RBP14.11□□□□□ -0.15
SHMT2-235ENST00000557740 GPR83Q9NYM4 423 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 NDOR1Q9UHB4 597 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 VPS4AQ9UN37 437 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 PLCL2Q9UPR0 1127 aa14.11□□□□□ -0.15
SHMT2-235ENST00000557740 PIKFYVEQ9Y2I7 2098 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 CYSRT1A8MQ03 144 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 PRMT5O14744 637 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 CD63P08962 238 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 MAGP20916 626 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 PEBP1P30086 187 aaKnown RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 TTPAP49638 278 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 SESN2P58004 480 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 BASP1P80723 227 aaKnown RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 SEMA3AQ14563 771 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 PCID2Q5JVF3 399 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 PTRHD1Q6GMV3 140 aaKnown RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 UNC5DQ6UXZ4 953 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 GSTA5Q7RTV2 222 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 LDB1Q86U70 411 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 TAX1BP1Q86VP1 789 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 VRK3Q8IV63 474 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 OTUD6BQ8N6M0 293 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 GLIS1Q8NBF1 620 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 FDCSPQ8NFU4 85 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 SLC22A18Q96BI1 424 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 GBP5Q96PP8 586 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 NDC1Q9BTX1 674 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 CARD6Q9BX69 1037 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 IFT80Q9P2H3 777 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 DHCR7Q9UBM7 475 aaKnown RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 CIDEBQ9UHD4 219 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 GNPTGQ9UJJ9 305 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 SLC39A10Q9ULF5 831 aa14.1□□□□□ -0.15
SHMT2-235ENST00000557740 PTRH2Q9Y3E5 179 aaKnown RBP14.1□□□□□ -0.15
SHMT2-235ENST00000557740 SEC16AO15027 2179 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 CLEC18AA5D8T8 446 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 IQCF5A8MTL0 148 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 H3BMH7 237 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 PEX12O00623 359 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 HCRTR1O43613 425 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 GPC4O75487 556 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 KLF7O75840 302 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-235ENST00000557740 SORBS2O94875 1100 aaKnown RBP14.09□□□□□ -0.15
SHMT2-235ENST00000557740 S1PR4O95977 384 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 IGHEP01854 428 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 ZSCAN5DPP0CG00 497 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 RPL22P35268 128 aaKnown RBP14.09□□□□□ -0.15
SHMT2-235ENST00000557740 SRSF1Q07955 248 aaKnown RBP eCLIP14.09□□□□□ -0.15
SHMT2-235ENST00000557740 SLC9A5Q14940 896 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 KYNUQ16719 465 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 MEI1Q5TIA1 1274 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 TTC23LQ6PF05 361 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 CLEC18BQ6UXF7 455 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 C4orf22Q6V702 233 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 HPS6Q86YV9 775 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 KRT222Q8N1A0 295 aa14.09□□□□□ -0.15
SHMT2-235ENST00000557740 MPP5Q8N3R9 675 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms