RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PKLRP30613 574 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 CSF2RBP32927 897 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 MSH2P43246 934 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 PDX1P52945 283 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 RAB15P59190 212 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 TAS2R39P59534 338 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ERVPABLB-1P60509 514 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 RAB10P61026 200 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ATP6V0D1P61421 351 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 RASA2Q15283 850 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 CYP2A13Q16696 494 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 TMEM164Q5U3C3 297 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 NKAIN2Q5VXU1 208 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 RAB11FIP2Q7L804 512 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ADAMTSL2Q86TH1 951 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ZNF761Q86XN6 746 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-234ENST00000557703 CPNE9Q8IYJ1 553 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ADGRF3Q8IZF5 1079 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 CFAP61Q8NHU2 1237 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ATL1Q8WXF7 558 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 UBXN10Q96LJ8 280 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 CCDC138Q96M89 665 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 FCRL4Q96PJ5 515 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 TEFMQ96QE5 360 aaKnown RBP13.27□□□□□ -0.29
SHMT2-234ENST00000557703 SLC30A3Q99726 388 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 OLFM1Q99784 485 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 MENTQ9BUN1 341 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 DERL2Q9GZP9 239 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 PCBD2Q9H0N5 130 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ZNF768Q9H5H4 540 aaKnown RBP13.27□□□□□ -0.29
SHMT2-234ENST00000557703 KLK13Q9UKR3 277 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 POMT2Q9UKY4 750 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 RAB21Q9UL25 225 aa13.27□□□□□ -0.29
SHMT2-234ENST00000557703 ATXN7L1Q9ULK2 861 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-234ENST00000557703 TDRKHQ9Y2W6 561 aaKnown RBP13.27□□□□□ -0.29
SHMT2-234ENST00000557703 MTO1Q9Y2Z2 717 aaKnown RBP13.27□□□□□ -0.29
SHMT2-234ENST00000557703 EXOC1LA0A1B0GW35 172 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 MED19A0JLT2 244 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 ACACBO00763 2458 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 ZBTB11O95625 1053 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 CHRM5P08912 532 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 HOXB3P14651 431 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 CD82P27701 267 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 PRDX3P30048 256 aaKnown RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 HSD11B2P80365 405 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 CDKL1Q00532 357 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 GRB7Q14451 532 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 SLC29A2Q14542 456 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 IL11RAQ14626 422 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 SLC5A12Q1EHB4 618 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 TMTC4Q5T4D3 741 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 PHF19Q5T6S3 580 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 IRGCQ6NXR0 463 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 DUS1LQ6P1R4 473 aaKnown RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 UBE2R2Q712K3 238 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 LCA5Q86VQ0 697 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 FBXO39Q8N4B4 442 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 OR8K5Q8NH50 307 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 SMPDL3AQ92484 453 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 RSC1A1Q92681 617 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 ISL2Q96A47 359 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 FAM136AQ96C01 138 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 LINGO1Q96FE5 620 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 ATXN7L3BQ96GX2 97 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 SLC41A2Q96JW4 573 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 CABS1Q96KC9 395 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 CCDC74BQ96LY2 380 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 PAFAH2Q99487 392 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 PITPNM3Q9BZ71 974 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 ASPSCR1Q9BZE9 553 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 SEMA6CQ9H3T2 930 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 FBXO8Q9NRD0 319 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 INTS7Q9NVH2 962 aaKnown RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 UTP6Q9NYH9 597 aaKnown RBP13.26□□□□□ -0.29
SHMT2-234ENST00000557703 SLC17A6Q9P2U8 582 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 TLK1Q9UKI8 766 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 ICKQ9UPZ9 632 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 PCDHB11Q9Y5F2 797 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 PCDHGA7Q9Y5G6 932 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 KLK4Q9Y5K2 254 aa13.26□□□□□ -0.29
SHMT2-234ENST00000557703 A0A087X1B8 175 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 PRAMEF33A0A0G2JMD5 474 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ARHGEF33A8MVX0 844 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 TARM1B6A8C7 271 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 NVLO15381 856 aaKnown RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 RASSF9O75901 435 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 WISP3O95389 354 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 SNRPAP09012 282 aaKnown RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 FAM153BP0C7A2 387 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 JMJD7P0C870 316 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 COL6A2P12110 1019 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 NELFEP18615 380 aaKnown RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 HRH2P25021 359 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 RBMS1P29558 406 aaKnown RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 HNMTP50135 292 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ACY1Q03154 408 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 FAM153CQ494X1 144 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 TAF1BQ53T94 588 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-234ENST00000557703 CACHD1Q5VU97 1274 aa13.25□□□□□ -0.29
SHMT2-234ENST00000557703 ADGRD1Q6QNK2 874 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms