RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, human

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLIRP-210	ENST00000557431	PCDHGA10	Q9Y5H3	936 aa		13.57	□□□□□ -0.24
SLIRP-210	ENST00000557431	CENPE	Q02224	2701 aa		13.57	□□□□□ -0.24
SLIRP-210	ENST00000557431	PJA2	O43164	708 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	CBFA2T2	O43439	604 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	MAG	P20916	626 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	ALAS2	P22557	587 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	CTNNA2	P26232	953 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	ACADL	P28330	430 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	HADHA	P40939	763 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	HADHB	P55084	474 aa	Known RBP	13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	NKAIN1	Q4KMZ8	207 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	C1QL3	Q5VWW1	255 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431		Q6ZS92	163 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	PARP9	Q8IXQ6	854 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	ZADH2	Q8N4Q0	377 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	UBE2Q2	Q8WVN8	375 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	CDKN2AIPNL	Q96HQ2	116 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	CNDP1	Q96KN2	507 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	SPATA13	Q96N96	652 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	NLE1	Q9NVX2	485 aa	Predicted RBP	13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	FBXL4	Q9UKA2	621 aa		13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	NOVA2	Q9UNW9	492 aa	Known RBP	13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	AAR2	Q9Y312	384 aa	Known RBP	13.56	□□□□□ -0.24
SLIRP-210	ENST00000557431	CELSR2	Q9HCU4	2923 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	ENO4	A6NNW6	628 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	E2F3	O00716	465 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	METTL18	O95568	372 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	ALPP	P05187	535 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	TPM1	P09493	284 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	VARS	P26640	1264 aa	Known RBP	13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	SHMT2	P34897	504 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	GRIA3	P42263	894 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	SRSF11	Q05519	484 aa	Known RBP	13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	GPR33	Q49SQ1	333 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	CCDC38	Q502W7	563 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	IGFL3	Q6UXB1	125 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	TTLL10	Q6ZVT0	673 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	COX15	Q7KZN9	410 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	VRK3	Q8IV63	474 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	DNAJC22	Q8N4W6	341 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	AMER2	Q8N7J2	671 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	RNF214	Q8ND24	703 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	LKAAEAR1	Q8TD35	194 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	HEXDC	Q8WVB3	486 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	PTER	Q96BW5	349 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	AP1M1	Q9BXS5	423 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	OSBPL8	Q9BZF1	889 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	SOX17	Q9H6I2	414 aa	Predicted RBP	13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	VPS37B	Q9H9H4	285 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	ATP13A2	Q9NQ11	1180 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	OSGIN2	Q9Y236	505 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	AP1M2	Q9Y6Q5	423 aa		13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	TEP1	Q99973	2627 aa	Known RBP	13.55	□□□□□ -0.24
SLIRP-210	ENST00000557431	PKDREJ	Q9NTG1	2253 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	ARHGAP10	A1A4S6	786 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	KRT87P	A6NCN2	255 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	RCCD1	A6NED2	376 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	AGPS	O00116	658 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	SOCS6	O14544	535 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	LRRTM2	O43300	516 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	OR1I1	O60431	355 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	NRP2	O60462	931 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	PRF1	P14222	555 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	GDF10	P55107	478 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	CACNG1	Q06432	222 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	RPA4	Q13156	261 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	SYTL3	Q4VX76	610 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	KCTD11	Q693B1	232 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	C11orf63	Q6NUN7	778 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	ZNF449	Q6P9G9	518 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	KCNMB4	Q86W47	210 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	TTC13	Q8NBP0	860 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	CFAP61	Q8NHU2	1237 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	PROKR1	Q8TCW9	393 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	GRHL3	Q8TE85	626 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	IP6K3	Q96PC2	410 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	NDC1	Q9BTX1	674 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	EURL	Q9NYK6	297 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	STOX2	Q9P2F5	926 aa	Predicted RBP	13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	CDC23	Q9UJX2	597 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	PCDHA13	Q9Y5I0	950 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	CSMD1	Q96PZ7	3565 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	CACNA1C	Q13936	2221 aa		13.54	□□□□□ -0.24
SLIRP-210	ENST00000557431	SLC5A10	A0PJK1	596 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	CCDC162P	A2VCL2	907 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431		H7C0S8	307 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	LIN7A	O14910	233 aa	Predicted RBP	13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	ZG16	O60844	167 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	STK10	O94804	968 aa	Known RBP	13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	MSN	P26038	577 aa	Known RBP	13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	TNFRSF8	P28908	595 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	FOXN2	P32314	431 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	CTNNA1	P35221	906 aa	Known RBP	13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	GCGR	P47871	477 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	OR1D4	P47884	311 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	GTF3C1	Q12789	2109 aa		13.53	□□□□□ -0.24
SLIRP-210	ENST00000557431	PRSS58	Q8IYP2	241 aa		13.53	□□□□□ -0.24

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