RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 GPR37L1O60883 481 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 ALDH3A2P51648 485 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 IFI35P80217 286 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 MGME1Q9BQP7 344 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 NSUN3Q9H649 340 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 MVB12BQ9H7P6 319 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 KLRG2A4D1S0 409 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 ZNF487B1APH4 448 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TNFRSF11BO00300 401 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 KDELR3O43731 214 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 SSNA1O43805 119 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 UNC5CO95185 931 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 PSMG1O95456 288 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 CCND3P30281 292 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 CDH13P55290 713 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 RPS15P62841 145 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 KIAA1161Q6NSJ0 714 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 LRRC69Q6ZNQ3 347 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TMEM110Q86TL2 294 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TRPV1Q8NER1 839 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 BPIFB6Q8NFQ5 453 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 FKBP10Q96AY3 582 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 PNO1Q9NRX1 252 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 CNTN6Q9UQ52 1028 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 MED31Q9Y3C7 131 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 HCN1O60741 890 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 KLHL18O94889 574 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 FARS2O95363 451 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 GSTT2BP0CG30 244 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 RPL17P18621 184 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 DNAJA1P31689 397 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 ASPAP45381 313 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 HSPA7P48741 367 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 NR1H2P55055 460 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 RPL6Q02878 288 aaKnown RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 TAF5Q15542 800 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TRABD2AQ86V40 505 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 C4orf32Q8N8J7 132 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 OR5L2Q8NGL0 311 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 LMX1AQ8TE12 382 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 ADAM7Q9H2U9 754 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 CHMP1AQ9HD42 196 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 KLRF1Q9NZS2 232 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 BACE2Q9Y5Z0 518 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 NME6O75414 186 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 BCAS2O75934 225 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 ACP5P13686 325 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 PGDP52209 483 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 NAA30Q147X3 362 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 IFI44LQ53G44 452 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 SLC30A6Q6NXT4 461 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 C22orf39Q6P5X5 142 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TMEM17Q86X19 198 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TRIB3Q96RU7 358 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 ARL8BQ9NVJ2 186 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 EDARQ9UNE0 448 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 ACOT7O00154 380 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 LCA5LO95447 670 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 FOSL2P15408 326 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 NCBP2P52298 156 aaKnown RBP eCLIP8.2□□□□□ -1.11e-7■■■■□ 22.3
CHD8-213ENST00000557364 JAM2P57087 298 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 ABATP80404 500 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 FOXK1P85037 733 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 QPRTQ15274 297 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 ARSJQ5FYB0 599 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 GRASPQ7Z6J2 395 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 TMCO2Q7Z6W1 182 aaPredicted RBP8.2□□□□□ -1.1
CHD8-213ENST00000557364 TDRPQ86YL5 185 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 TNFRSF25Q93038 417 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 ZSWIM3Q96MP5 696 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.2□□□□□ -1.18e-7■■■■□ 22.5
CHD8-213ENST00000557364 TOR4AQ9NXH8 423 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 DKKL1Q9UK85 242 aa8.2□□□□□ -1.1
CHD8-213ENST00000557364 FFAR2O15552 330 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 KAT7O95251 611 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 ATP6V1G2O95670 118 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 CST3P01034 146 aaPredicted RBP8.19□□□□□ -1.1
CHD8-213ENST00000557364 MT-ND5P03915 603 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 PLEKHS1Q5SXH7 462 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 IL23RQ5VWK5 629 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 ARL9Q6T311 187 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 DCP2Q8IU60 420 aaKnown RBP8.19□□□□□ -1.1
CHD8-213ENST00000557364 PLXDC1Q8IUK5 500 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 WDR12Q9GZL7 423 aaKnown RBP8.19□□□□□ -1.1
CHD8-213ENST00000557364 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 TMEM5Q9Y2B1 443 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 MAP4K5Q9Y4K4 846 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 YJEFN3A6XGL0 299 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 DRD1P21728 446 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 GBE1Q04446 702 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 PLP2Q04941 152 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 SEMA3AQ14563 771 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 SOWAHAQ2M3V2 549 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 OR2T34Q8NGX1 318 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 OR2T3Q8NH03 318 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 SNIP1Q8TAD8 396 aaKnown RBP8.19□□□□□ -1.1
CHD8-213ENST00000557364 ZNF296Q8WUU4 475 aaPredicted RBP8.19□□□□□ -1.1
CHD8-213ENST00000557364 CST11Q9H112 138 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 MEMO1Q9Y316 297 aa8.19□□□□□ -1.1
CHD8-213ENST00000557364 SH3PXD2BA1X283 911 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms