RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 TBC1D16Q8TBP0 767 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 NSL1Q96IY1 281 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 NCAPGQ9BPX3 1015 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 TRAF4Q9BUZ4 470 aaPredicted RBP3.59□□□□□ -1.83
VRK1-207ENST00000557352 PLK3Q9H4B4 646 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 PAG1Q9NWQ8 432 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 TAB2Q9NYJ8 693 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.59□□□□□ -1.83
VRK1-207ENST00000557352 MYH15Q9Y2K3 1946 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 TNRQ92752 1358 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 CCDC7Q96M83 1385 aa3.59□□□□□ -1.83
VRK1-207ENST00000557352 MED14O60244 1454 aa3.59□□□□□ -1.84
VRK1-207ENST00000557352 TOPAZ1Q8N9V7 1692 aa3.59□□□□□ -1.84
VRK1-207ENST00000557352 MON2Q7Z3U7 1717 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 KIF20BQ96Q89 1820 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 A0A1W2PRB8 838 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 E9PI62 339 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 NPHP1O15259 732 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 SRPRAP08240 638 aaKnown RBP3.58□□□□□ -1.84
VRK1-207ENST00000557352 TRIM49P0CI25 452 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 TRIM49CP0CI26 452 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 EFNA1P20827 205 aaPredicted RBP3.58□□□□□ -1.84
VRK1-207ENST00000557352 TLX1P31314 330 aaPredicted RBP3.58□□□□□ -1.84
VRK1-207ENST00000557352 PLA2G7Q13093 441 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 HSP90AB4PQ58FF6 505 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 INTS11Q5TA45 600 aaKnown RBP3.58□□□□□ -1.84
VRK1-207ENST00000557352 SARM1Q6SZW1 724 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 PIGZQ86VD9 579 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 LSMEM2Q8N112 164 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 DCLK2Q8N568 766 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 PCYOX1LQ8NBM8 494 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 KBTBD8Q8NFY9 601 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 SUSD6Q92537 303 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 MOAP1Q96BY2 351 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 CLEC7AQ9BXN2 247 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 DNAJC18Q9H819 358 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 HHATLQ9HCP6 504 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 PGAP2Q9UHJ9 254 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 KLK13Q9UKR3 277 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 NENFQ9UMX5 172 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 CMAHPQ9Y471 501 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 RIPK3Q9Y572 518 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 KTN1Q86UP2 1357 aaKnown RBP3.58□□□□□ -1.84
VRK1-207ENST00000557352 USP54Q70EL1 1684 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 AGRNO00468 2067 aa3.58□□□□□ -1.84
VRK1-207ENST00000557352 LOC101059948A0A1B0GTJ6 334 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 PRSS51A0A1B0GVH4 220 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 A8MZ25 164 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 HS6ST1O60243 411 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 HSPA5P11021 654 aaKnown RBP3.57□□□□□ -1.84
VRK1-207ENST00000557352 RARGP13631 454 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 ACADSP16219 412 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 PTPRMP28827 1452 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 CAMPP49913 170 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 SNRPEP62304 92 aaKnown RBP3.57□□□□□ -1.84
VRK1-207ENST00000557352 IKQ13123 557 aaPredicted RBP3.57□□□□□ -1.84
VRK1-207ENST00000557352 IDI1Q13907 227 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 NWD1Q149M9 1564 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 SGSM1Q2NKQ1 1148 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 FASTKD1Q53R41 847 aaKnown RBP3.57□□□□□ -1.84
VRK1-207ENST00000557352 LINGO4Q6UY18 593 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 TMTC3Q6ZXV5 915 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 PXKQ7Z7A4 578 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 ARID3BQ8IVW6 561 aaPredicted RBP3.57□□□□□ -1.84
VRK1-207ENST00000557352 PDILTQ8N807 584 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 OR4C3Q8NH37 302 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 POMGNT1Q8WZA1 660 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 FAM81BQ96LP2 452 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 C9orf78Q9NZ63 289 aaPredicted RBP3.57□□□□□ -1.84
VRK1-207ENST00000557352 LRWD1Q9UFC0 647 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 TMEM2Q9UHN6 1383 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 RIMS2Q9UQ26 1411 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 NINLQ9Y2I6 1382 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 PCDHGA5Q9Y5G8 931 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 CSAG2Q9Y5P2 127 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 LYVE1Q9Y5Y7 322 aa3.57□□□□□ -1.84
VRK1-207ENST00000557352 MAP2P11137 1827 aaKnown RBP3.56□□□□□ -1.84
VRK1-207ENST00000557352 RGPD8O14715 1765 aaPredicted RBP3.56□□□□□ -1.84
VRK1-207ENST00000557352 PTCH1Q13635 1447 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 FAM135BQ49AJ0 1406 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 PIK3R4Q99570 1358 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 NPC1L1Q9UHC9 1359 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 PLEKHG1Q9ULL1 1385 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 KIF7Q2M1P5 1343 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 A0A1W2PN81 502 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 MSGN1A6NI15 193 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 KLF11O14901 512 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 TO15178 435 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 PRKRAO75569 313 aaKnown RBP3.56□□□□□ -1.84
VRK1-207ENST00000557352 DDX58O95786 925 aaKnown RBP3.56□□□□□ -1.84
VRK1-207ENST00000557352 GPIP06744 558 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 CA4P22748 312 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 CHRNA7P36544 502 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 PNRC1Q12796 327 aaPredicted RBP3.56□□□□□ -1.84
VRK1-207ENST00000557352 GLIPR1L2Q4G1C9 344 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 GRTP1Q5TC63 336 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 KLHL35Q6PF15 583 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 IL27RAQ6UWB1 636 aa3.56□□□□□ -1.84
VRK1-207ENST00000557352 SCYL3Q8IZE3 742 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms