RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	WASH6P	Q9NQA3	447 aa		4.61	□□□□□ -1.67
SCFD1-223	ENST00000557076	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
SCFD1-223	ENST00000557076	CPNE7	Q9UBL6	633 aa		4.61	□□□□□ -1.67
SCFD1-223	ENST00000557076	OR12D3	Q9UGF7	316 aa		4.61	□□□□□ -1.67
SCFD1-223	ENST00000557076	RARRES3	Q9UL19	164 aa		4.61	□□□□□ -1.67
SCFD1-223	ENST00000557076	STAP1	Q9ULZ2	295 aa		4.61	□□□□□ -1.67
SCFD1-223	ENST00000557076	FER1L5	A0AVI2	2057 aa		4.61	□□□□□ -1.67
SCFD1-223	ENST00000557076		A0A1W2PRX2	142 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMEM191C	A6NGB0	347 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	SCD	O00767	359 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	PDPK1	O15530	556 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	KIF1C	O43896	1103 aa	Known RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	DAB1	O75553	588 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	JRK	O75564	520 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	UBXN7	O94888	489 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	LETM1	O95202	739 aa	Predicted RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	PIGN	O95427	931 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	EML2	O95834	649 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	SLC2A4	P14672	509 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	FOLR1	P15328	257 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	AMD1	P17707	334 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	XRCC1	P18887	633 aa	Predicted RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	KLK2	P20151	261 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	APEX1	P27695	318 aa	Known RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ADRA1B	P35368	520 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	HADHA	P40939	763 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	GFER	P55789	205 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	GSDMD	P57764	484 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	YBEY	P58557	167 aa	Predicted RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	RHOA	P61586	193 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ACY1	Q03154	408 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	DEUP1	Q05D60	604 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	NSUN2	Q08J23	767 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	CETN1	Q12798	172 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	RAPSN	Q13702	412 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ACOX1	Q15067	660 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	STK38	Q15208	465 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	CFAP58	Q5T655	872 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	MANEAL	Q5VSG8	457 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	CACHD1	Q5VU97	1274 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	OTUD1	Q5VV17	481 aa	Predicted RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	RPUSD3	Q6P087	351 aa	Known RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	IGFL2	Q6UWQ7	119 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMEM26	Q6ZUK4	368 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	SPATC1	Q76KD6	591 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	DPPA4	Q7L190	304 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	RRAGA	Q7L523	313 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ZNF627	Q7L945	461 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	BNIPL	Q7Z465	357 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ZDHHC17	Q8IUH5	632 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	GRAMD1C	Q8IYS0	662 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	CEP57L1	Q8IYX8	460 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	PPM1K	Q8N3J5	372 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	C1orf131	Q8NDD1	294 aa	Known RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	HIPK4	Q8NE63	616 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	OR8K5	Q8NH50	307 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	DNAJB14	Q8TBM8	379 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	PPP4R1	Q8TF05	950 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	CHTF18	Q8WVB6	975 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ASB15	Q8WXK1	588 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	KAT5	Q92993	513 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	SLC35C1	Q96A29	364 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	MIEF2	Q96C03	454 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	RNF31	Q96EP0	1072 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	NT5C1B	Q96P26	610 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TGM7	Q96PF1	710 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	GBP4	Q96PP9	640 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	DNAJC7	Q99615	494 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	NCAPG	Q9BPX3	1015 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TREX2	Q9BQ50	279 aa	Predicted RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TBC1D10A	Q9BXI6	508 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	RAB33B	Q9H082	229 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ENKD1	Q9H0I2	346 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	CHST8	Q9H2A9	424 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	ATP13A3	Q9H7F0	1226 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	SUDS3	Q9H7L9	328 aa	Predicted RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	UPF2	Q9HAU5	1272 aa	Known RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMEM248	Q9NWD8	314 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	OGFR	Q9NZT2	677 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	CNOT8	Q9UFF9	292 aa	Known RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TBC1D29	Q9UFV1	150 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	DNAI1	Q9UI46	699 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	SNX7	Q9UNH6	387 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	TMA7	Q9Y2S6	64 aa	Known RBP	4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	NEU2	Q9Y3R4	380 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	PCDHA9	Q9Y5H5	950 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076	PIKFYVE	Q9Y2I7	2098 aa		4.6	□□□□□ -1.67
SCFD1-223	ENST00000557076		A0A1W2PQ67	120 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	PSMD11	O00231	422 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	CCL21	O00585	134 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	TRAFD1	O14545	582 aa	Predicted RBP	4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	PCDH17	O14917	1159 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	SLC16A3	O15427	465 aa	Known RBP	4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	P4HA2	O15460	535 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	H2AFY	O75367	372 aa	Known RBP	4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	RASSF9	O75901	435 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	YEATS4	O95619	227 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	CRTAM	O95727	393 aa		4.59	□□□□□ -1.67
SCFD1-223	ENST00000557076	JCHAIN	P01591	159 aa		4.59	□□□□□ -1.67

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