RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 P2RY8Q86VZ1 359 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 ZDHHC21Q8IVQ6 265 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 ZNF540Q8NDQ6 660 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 PIK3C3Q8NEB9 887 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 EID2BQ96D98 161 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 ZNF641Q96N77 438 aaPredicted RBP11.14□□□□□ -0.63
SRP54-213ENST00000556994 SPC25Q9HBM1 224 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 hCG_2039718K7EN88 272 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 PER2O15055 1255 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 SLC22A1O15245 554 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 RAD51BO15315 384 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 OAZ2O95190 189 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 LRATO95237 230 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 ESR1P03372 595 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 GSTT2P0CG29 244 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 GSTT2BP0CG30 244 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CDKN2CP42773 168 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 PTGER3P43115 390 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 GNPDA1P46926 289 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CLCN4P51793 760 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 SLC13A2Q13183 592 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 SLC14A1Q13336 389 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 DSC3Q14574 896 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 NFE2Q16621 373 aaPredicted RBP11.14□□□□□ -0.63
SRP54-213ENST00000556994 CTXN3Q4LDR2 81 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CACHD1Q5VU97 1274 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CPZQ66K79 652 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 PTRHD1Q6GMV3 140 aaKnown RBP11.14□□□□□ -0.63
SRP54-213ENST00000556994 HIPK1Q86Z02 1210 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 OR6Q1Q8NGQ2 317 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 PSMA8Q8TAA3 256 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 DYNC2LI1Q8TCX1 351 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 S100ZQ8WXG8 99 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 YIPF6Q96EC8 236 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 UROC1Q96N76 676 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 MAGEH1Q9H213 219 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 P2RY12Q9H244 342 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 CLMPQ9H6B4 373 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 LRTM1Q9HBL6 345 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 MAGEE1Q9HCI5 957 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 C1orf109Q9NX04 203 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 VPS51Q9UID3 782 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 TSC22D4Q9Y3Q8 395 aa11.14□□□□□ -0.63
SRP54-213ENST00000556994 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
SRP54-213ENST00000556994 GOLGA8CPA6NN73 597 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 SCAMP3O14828 347 aaKnown RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 MYO1DO94832 1006 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 IL6P05231 212 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 ALPIP09923 528 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 BCKDHAP12694 445 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 ACVR2AP27037 513 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 NRIP1P48552 1158 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 SLC35A2P78381 396 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 CPSF6Q16630 551 aaKnown RBP eCLIP11.13□□□□□ -0.63
SRP54-213ENST00000556994 HIST2H2ACQ16777 129 aaPredicted RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 ZNF362Q5T0B9 420 aaPredicted RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 FAM151BQ6UXP7 276 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 PLEKHG7Q6ZR37 379 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 ZNF551Q7Z340 670 aaPredicted RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 ADAMTSL2Q86TH1 951 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 DENND1CQ8IV53 801 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 FUBP3Q96I24 572 aaKnown RBP eCLIP11.13□□□□□ -0.63
SRP54-213ENST00000556994 ZNF300Q96RE9 604 aaPredicted RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 SH3GL1Q99961 368 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 BTBD2Q9BX70 525 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 OLA1Q9NTK5 396 aaKnown RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 WWOXQ9NZC7 414 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 OPTCQ9UBM4 332 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 SLCO3A1Q9UIG8 710 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 VPS4AQ9UN37 437 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 DLGAP4Q9Y2H0 992 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 GMPPBQ9Y5P6 360 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 PRSS21Q9Y6M0 314 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 KDELR3O43731 214 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 SEC24AO95486 1093 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 F11P03951 625 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 LCKP06239 509 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 RETP07949 1114 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 GSSP48637 474 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 GZMMP51124 257 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 ZNF598Q86UK7 904 aaKnown RBP11.13□□□□□ -0.63
SRP54-213ENST00000556994 TRPV1Q8NER1 839 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 HTRA1Q92743 480 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 PYCR2Q96C36 320 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 TSSK3Q96PN8 268 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 ASPSCR1Q9BZE9 553 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 GPR63Q9BZJ6 419 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 DUSP21Q9H596 190 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 SERHLQ9NQF3 203 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 NECTIN3Q9NQS3 549 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 GPRC5BQ9NZH0 403 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 ZNF229Q9UJW7 825 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 PCDHB9Q9Y5E1 797 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 PCDHGB1Q9Y5G3 927 aa11.13□□□□□ -0.63
SRP54-213ENST00000556994 PLXNA3P51805 1871 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 TRBV5-3A0A0A0MS03 114 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 TTC34A8MYJ7 566 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 UPK3BL1B0FP48 263 aa11.12□□□□□ -0.63
SRP54-213ENST00000556994 UPK3BL2E5RIL1 263 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms