RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PCSK4Q6UW60 755 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 TIPARPQ7Z3E1 657 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PRICKLE2Q7Z3G6 844 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 TBC1D21Q8IYX1 336 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 GPR135Q8IZ08 494 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 RAB42Q8N4Z0 105 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 LILRA3Q8N6C8 439 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SKA2Q8WVK7 121 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SLC22A18Q96BI1 424 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SGSM3Q96HU1 749 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 RMDN2Q96LZ7 410 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PANX3Q96QZ0 392 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SLC25A18Q9H1K4 315 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 LHX9Q9NQ69 397 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CASS4Q9NQ75 786 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CHRAC1Q9NRG0 131 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CATSPERZQ9NTU4 200 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 OR6C2Q9NZP2 312 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SAMD15Q9P1V8 674 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 TUBD1Q9UJT1 453 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CROTQ9UKG9 612 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PPP2R2CQ9Y2T4 447 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 TDRKHQ9Y2W6 561 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 TCAF1Q9Y4C2 921 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 MRFAP1Q9Y605 127 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 GOLGA6L10A0A0M3HER8 536 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 MAGEB16A2A368 324 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SLC9B1P1A6NJY1 282 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 J3QKU1 62 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PRMT5O14744 637 aaPredicted RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CD3EAPO15446 510 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SLC28A2O43868 658 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 C1QL1O75973 258 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 HBQ1P09105 142 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 EBLN1P0CF75 366 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 ZSCAN5DPP0CG00 497 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PRSS56P0CW18 603 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CYP2A7P20853 494 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 GRIA1P42261 906 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 ARCN1P48444 511 aaKnown RBP7.11□□□□□ -1.27
SCFD1-222ENST00000556768 POLE2P56282 527 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PPP1CAP62136 330 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 ERV3-1Q14264 604 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 TMED2Q15363 201 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 DEFB109BQ30KR1 87 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CASC4Q6P4E1 433 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 OTOAQ7RTW8 1153 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 MPP5Q8N3R9 675 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 OR52E1Q8NGJ3 308 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 OR13J1Q8NGT2 312 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 OR5K2Q8NHB8 316 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CPT1BQ92523 772 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 CLIP3Q96DZ5 547 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 PBKQ96KB5 322 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 FOPNLQ96NB1 174 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 HGH1Q9BTY7 390 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 TLR10Q9BXR5 811 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 SEMA4CQ9C0C4 833 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 IL17BQ9UHF5 180 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 POMT2Q9UKY4 750 aa7.11□□□□□ -1.27
SCFD1-222ENST00000556768 LRP4O75096 1905 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 GOLGA6L3A6NEY3 463 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 OR51F1A6NGY5 319 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 KIF5CO60282 957 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 OR1I1O60431 355 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 CREG1O75629 220 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 MSL3P1P0C860 447 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 EDN3P14138 238 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 ZNF28P17035 718 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 WT1P19544 449 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-222ENST00000556768 FOXN2P32314 431 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 KCNJ1P48048 391 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 KPNA2P52292 529 aaKnown RBP7.1□□□□□ -1.27
SCFD1-222ENST00000556768 ACVR1Q04771 509 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 CDC20Q12834 499 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 KCNAB2Q13303 367 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 LINC00303Q3SY05 128 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 DNAJC21Q5F1R6 531 aaKnown RBP7.1□□□□□ -1.27
SCFD1-222ENST00000556768 ARSJQ5FYB0 599 aaPredicted RBP7.1□□□□□ -1.27
SCFD1-222ENST00000556768 ARMC3Q5W041 872 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 LRRC8BQ6P9F7 803 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 ATG14Q6ZNE5 492 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 LRRC6Q86X45 466 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 EXD3Q8N9H8 876 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 MAGEC3Q8TD91 643 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 MR1Q95460 341 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 MAGOHBQ96A72 148 aaKnown RBP7.1□□□□□ -1.27
SCFD1-222ENST00000556768 TCTN2Q96GX1 697 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 ZNF778Q96MU6 729 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 TCF12Q99081 682 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 C17orf62Q9BQA9 187 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 CARD6Q9BX69 1037 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 TWSG1Q9GZX9 223 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 IRAK4Q9NWZ3 460 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 SLC2A6Q9UGQ3 507 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 GNPTGQ9UJJ9 305 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 SLC39A10Q9ULF5 831 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 G3BP2Q9UN86 482 aaKnown RBP7.1□□□□□ -1.27
SCFD1-222ENST00000556768 POLHQ9Y253 713 aa7.1□□□□□ -1.27
SCFD1-222ENST00000556768 BTRCQ9Y297 605 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms