RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 ZDHHC24Q6UX98 284 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 LINC00696Q6ZRV3 163 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 ARCQ7LC44 396 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 PEG10Q86TG7 708 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 SERINC5Q86VE9 423 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 CCDC50Q8IVM0 306 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 MAP7D3Q8IWC1 876 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 CRYBG2Q8N1P7 616 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 TMEM86AQ8N2M4 240 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 SLC15A4Q8N697 577 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 MRPL43Q8N983 215 aaKnown RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 DUSP19Q8WTR2 217 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 FAM216AQ8WUB2 273 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 ANKRD49Q8WVL7 239 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 TFAP2BQ92481 460 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 MCRS1Q96EZ8 462 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 HSFY1Q96LI6 401 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 C1orf74Q96LT6 269 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 CMTM3Q96MX0 182 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 MCEEQ96PE7 176 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 FMO2Q99518 471 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 PIP5K1AQ99755 562 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 NAA11Q9BSU3 229 aaPredicted RBP5.1□□□□□ -1.59
SRP54-211ENST00000556445 KLK15Q9H2R5 256 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 SMYD3Q9H7B4 428 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 ZBTB26Q9HCK0 441 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 XPNPEP3Q9NQH7 507 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.1□□□□□ -1.59
SRP54-211ENST00000556445 ARHGEF3Q9NR81 526 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 TMEM51Q9NW97 253 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 PSD3Q9NYI0 1048 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 SUN2Q9UH99 717 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 AMACRQ9UHK6 382 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 NFU1Q9UMS0 254 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 BTBD3Q9Y2F9 522 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 PCDHGA5Q9Y5G8 931 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 PCDHGA1Q9Y5H4 931 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 SNX9Q9Y5X1 595 aa5.1□□□□□ -1.59
SRP54-211ENST00000556445 A0A1W2PRV1 198 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 ZNF487B1APH4 448 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 VWC2LB2RUY7 222 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 H0YC42 278 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 PEX12O00623 359 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 DHHO43323 396 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 KIF1CO43896 1103 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 PEX11AO75192 247 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 TRIM16O95361 564 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 IGLV2-14P01704 120 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 EIF2S1P05198 315 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 CCNA2P20248 432 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 GPD1P21695 349 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 KELP23276 732 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 WARSP23381 471 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 MAP2K2P36507 400 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 GNL1P36915 607 aaPredicted RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 GRIA3P42263 894 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 CASP3P42574 277 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 GPD2P43304 727 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 NRIP1P48552 1158 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 LHX1P48742 406 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 NDUFV1P49821 464 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 ELLP55199 621 aaPredicted RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 CDH8P55286 799 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 KCNJ10P78508 379 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 TBL3Q12788 808 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 TUBB3Q13509 450 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 TFDP2Q14188 446 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 PDK2Q15119 407 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 PPP1R7Q15435 360 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 CCDC142Q17RM4 750 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 PTPN20Q4JDL3 420 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 BOLA3Q53S33 107 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 TFDP3Q5H9I0 405 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 NHSL2Q5HYW2 709 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 FCRL6Q6DN72 434 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 OR6B2Q6IFH4 312 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 DENND1BQ6P3S1 775 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 CHST9Q7L1S5 443 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 MRPL10Q7Z7H8 261 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 ADCK1Q86TW2 530 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 FAM228AQ86W67 206 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 MAML2Q8IZL2 1156 aaPredicted RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 ARFGAP2Q8N6H7 521 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 RTL3Q8N8U3 475 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 PRELID2Q8N945 189 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 KLHDC9Q8NEP7 349 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 HDAC7Q8WUI4 952 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 KCNE4Q8WWG9 221 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 TRIB2Q92519 343 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 ELP4Q96EB1 424 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 CAPNS2Q96L46 248 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 TXN2Q99757 166 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 CNPY3Q9BT09 278 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 HTATIP2Q9BUP3 242 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 OSBPL8Q9BZF1 889 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 DCLK3Q9C098 648 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 ELOVL4Q9GZR5 314 aa5.09□□□□□ -1.59
SRP54-211ENST00000556445 STMN4Q9H169 189 aaPredicted RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 NXF3Q9H4D5 531 aaKnown RBP5.09□□□□□ -1.59
SRP54-211ENST00000556445 PLEKHA2Q9HB19 425 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms