RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ZNF500O60304 480 aaPredicted RBP9.36□□□□□ -0.91
SRP54-210ENST00000556380 MAN1A2O60476 641 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 TNFSF15O95150 251 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 C1orf105O95561 183 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 ITGA2BP08514 1039 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 GSTA2P09210 222 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 BMP2P12643 396 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 ITIH1P19827 911 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 SSTR1P30872 391 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 TSPAN7P41732 249 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 ABCG1P45844 678 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 CDKN2DP55273 166 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 ERVPABLB-1P60509 514 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 KRT33BQ14525 404 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 PLCL1Q15111 1095 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 NR6A1Q15406 480 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 KYNUQ16719 465 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 TBC1D25Q3MII6 688 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 SNAP47Q5SQN1 464 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 RBM20Q5T481 1227 aaKnown RBP9.36□□□□□ -0.91
SRP54-210ENST00000556380 C3orf62Q6ZUJ4 267 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 NEK10Q6ZWH5 1172 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 SLC26A11Q86WA9 606 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 AMIGO1Q86WK6 493 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 PROSER1Q86XN7 944 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 RELL1Q8IUW5 271 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 PALM2Q8IXS6 379 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 SIDT2Q8NBJ9 832 aaKnown RBP9.36□□□□□ -0.91
SRP54-210ENST00000556380 AGBL5Q8NDL9 886 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 FLVCR1-AS1Q8TAF5 88 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 CD200R1Q8TD46 325 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 LCN9Q8WX39 176 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 ZDHHC12Q96GR4 267 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 ZNF578Q96N58 590 aaPredicted RBP9.36□□□□□ -0.91
SRP54-210ENST00000556380 TGM7Q96PF1 710 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 CD180Q99467 661 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 NDNQ99608 321 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 GPR21Q99679 349 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 HGH1Q9BTY7 390 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 FAM129AQ9BZQ8 928 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 B3GNT4Q9C0J1 378 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 SRMSQ9H3Y6 488 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 XKR8Q9H6D3 395 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 LRRC4CQ9HCJ2 640 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 PPANQ9NQ55 473 aaKnown RBP9.36□□□□□ -0.91
SRP54-210ENST00000556380 FAM114A2Q9NRY5 505 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 OCIAD1Q9NX40 245 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 SIDT1Q9NXL6 827 aaKnown RBP9.36□□□□□ -0.91
SRP54-210ENST00000556380 PCDHGA7Q9Y5G6 932 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 NFS1Q9Y697 457 aa9.36□□□□□ -0.91
SRP54-210ENST00000556380 IGHV5-51A0A0C4DH38 117 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 FAM159BA6NKW6 160 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 A8MU76 341 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 C9orf172C9J069 976 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 GFYI3L273 518 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 AGRPO00253 132 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 BTN3A1O00481 513 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 NVLO15381 856 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 PSIP1O75475 530 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 PIAS1O75925 651 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 NELFEP18615 380 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 POLR2CP19387 275 aaPredicted RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 RBMS1P29558 406 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 CSTF2P33240 577 aaKnown RBP eCLIP9.35□□□□□ -0.91
SRP54-210ENST00000556380 SKIV2L2P42285 1042 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 KPNA2P52292 529 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 MC2RQ01718 297 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 CCSMST1Q4G0I0 132 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 IRGCQ6NXR0 463 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 FAM92BQ6ZTR7 304 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 STRA8Q7Z7C7 330 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 ZC3HC1Q86WB0 502 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 OOSP2Q86WS3 158 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 DCUN1D3Q8IWE4 304 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 CCDC116Q8IYX3 515 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 CARFQ8N187 725 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 LINC01555Q8NAE3 123 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 CFAP61Q8NHU2 1237 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 GABPB2Q8TAK5 448 aaPredicted RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 DENND1AQ8TEH3 1009 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 ASB11Q8WXH4 323 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 ZCCHC14Q8WYQ9 949 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 FGF11Q92914 225 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 USP7Q93009 1102 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 PMEPA1Q969W9 287 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 SLC41A2Q96JW4 573 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 PPM1MQ96MI6 270 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 MAP3K3Q99759 626 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 OLFM1Q99784 485 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 ARHGAP9Q9BRR9 750 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 SPRY4Q9C004 299 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 CCDC68Q9H2F9 335 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 ZNF768Q9H5H4 540 aaKnown RBP9.35□□□□□ -0.91
SRP54-210ENST00000556380 SPHK1Q9NYA1 384 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 OR6C2Q9NZP2 312 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 PISDQ9UG56 409 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 KLHL3Q9UH77 587 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 ACSL6Q9UKU0 697 aa9.35□□□□□ -0.91
SRP54-210ENST00000556380 POMT2Q9UKY4 750 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms