RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 TEX26Q8N6G2 289 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 LRRC57Q8N9N7 239 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 FAM71DQ8N9W8 422 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 GDAP1Q8TB36 358 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 CCDC110Q8TBZ0 833 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 BLOC1S5Q8TDH9 187 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 LMX1AQ8TE12 382 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 PIH1D2Q8WWB5 315 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 MAML1Q92585 1016 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 MIEF2Q96C03 454 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 LRRC45Q96CN5 670 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 AP2M1Q96CW1 435 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 NUS1Q96E22 293 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 SCRN2Q96FV2 425 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 HES6Q96HZ4 224 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 BMFQ96LC9 184 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 LENG8Q96PV6 779 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-237ENST00000556274 IL12RB2Q99665 862 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 APOL2Q9BQE5 337 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 MGME1Q9BQP7 344 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 CPPED1Q9BRF8 314 aaPredicted RBP4.62□□□□□ -1.67
ATXN3-237ENST00000556274 TMEM121Q9BTD3 319 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 APOOQ9BUR5 198 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 SPATA16Q9BXB7 569 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 C1QTNF3Q9BXJ4 246 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 FSD1LQ9BXM9 530 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 SLC13A1Q9BZW2 595 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 SLC25A51Q9H1U9 297 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 ABCG8Q9H221 673 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 BCO1Q9HAY6 547 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 ZNHIT2Q9UHR6 403 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 TMEM98Q9Y2Y6 226 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 TSC22D4Q9Y3Q8 395 aa4.62□□□□□ -1.67
ATXN3-237ENST00000556274 FRYLO94915 3013 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CEP250Q9BV73 2442 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ZNF106Q9H2Y7 1883 aaKnown RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 A0A1B0GTQ1 180 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 A0A1W2PR77 199 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CCDC78A2IDD5 438 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 NEMP2A6NFY4 417 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 NPIPB15A6NHN6 443 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 TRAFD1O14545 582 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 AREL1O15033 823 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 LATO43561 262 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 SOCS5O75159 536 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 USP12O75317 370 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ANXA9O76027 345 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 SNUPNO95149 360 aaKnown RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 NDST3O95803 873 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 GAS8O95995 478 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 FGGP02679 453 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ANXA6P08133 673 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 MMP2P08253 660 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ADRB1P08588 477 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CD59P13987 128 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ETS1P14921 441 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 TPH1P17752 444 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 MSNP26038 577 aaKnown RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 PSMB4P28070 264 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 MMP12P39900 470 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 GNPDA1P46926 289 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 POLD2P49005 469 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 LIMK1P53667 647 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 GEMP55040 296 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 NXPH1P58417 271 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 SRP54P61011 504 aaKnown RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 GNG11P61952 73 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 IFI35P80217 286 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 WASHC5Q12768 1159 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CNGA3Q16281 694 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 KCTD19Q17RG1 926 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 DEFB133Q30KQ1 61 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 SIRPB2Q5JXA9 342 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 N4BP2L1Q5TBK1 243 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 LRRC66Q68CR7 880 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 PNCKQ6P2M8 343 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 PPP1R21Q6ZMI0 780 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 GCNT7Q6ZNI0 430 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 TAF8Q7Z7C8 310 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 PRUNE1Q86TP1 453 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 IQCHQ86VS3 1027 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 VSIG1Q86XK7 387 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 SLC13A5Q86YT5 568 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 NAXDQ8IW45 347 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 SLC35F6Q8N357 371 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CCDC89Q8N998 374 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 TRIM58Q8NG06 486 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ARRDC2Q8TBH0 407 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 NRG4Q8WWG1 115 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ATG4AQ8WYN0 398 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 ST8SIA2Q92186 375 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 SCAMP4Q969E2 229 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CENPTQ96BT3 561 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 IMP4Q96G21 291 aaKnown RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 MS4A14Q96JA4 679 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CNDP2Q96KP4 475 aaKnown RBP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 CAPZA3Q96KX2 299 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 TEKT5Q96M29 485 aa4.61□□□□□ -1.67
ATXN3-237ENST00000556274 QKIQ96PU8 341 aaKnown RBP eCLIP4.61□□□□□ -1.67
ATXN3-237ENST00000556274 KLF6Q99612 283 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms