RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 GDPD5Q8WTR4 605 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 SUSD6Q92537 303 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 SCAMP4Q969E2 229 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 ROPN1LQ96C74 230 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 AP2M1Q96CW1 435 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 TUBGCP3Q96CW5 907 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 RCN3Q96D15 328 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 ZFYVE19Q96K21 471 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 ZNF514Q96K75 400 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-235ENST00000556082 CLPTM1LQ96KA5 538 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 KCNA7Q96RP8 456 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 SLC29A3Q9BZD2 475 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 BRINP2Q9C0B6 783 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 MTG2Q9H4K7 406 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 IPPKQ9H8X2 491 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 LMCD1Q9NZU5 365 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 OPTCQ9UBM4 332 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 TRPS1Q9UHF7 1281 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 POLG2Q9UHN1 485 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 BCAP29Q9UHQ4 241 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 CNOT6Q9ULM6 557 aaKnown RBP8.11□□□□□ -1.11
ATXN3-235ENST00000556082 G3BP2Q9UN86 482 aaKnown RBP8.11□□□□□ -1.11
ATXN3-235ENST00000556082 PDE10AQ9Y233 779 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 POMPQ9Y244 141 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 NDUFAF1Q9Y375 327 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 FIS1Q9Y3D6 152 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 L3MBTL1Q9Y468 752 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 LRRC42Q9Y546 428 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 ASB1Q9Y576 335 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 GPR45Q9Y5Y3 372 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 MYO7AQ13402 2215 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 SCN8AQ9UQD0 1980 aa8.11□□□□□ -1.11
ATXN3-235ENST00000556082 ATP6AP2A0A1C7CYW4 349 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 SLC5A10A0PJK1 596 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 FADS2P1A8MWK0 482 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 C1QTNF3-AMACRE9PGA6 284 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 NPIPB8E9PQR5 432 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 KPNA3O00505 521 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 FBP2O00757 339 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 KATNA1O75449 491 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ATP6AP2O75787 350 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 OR4F21O95013 312 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 KAT7O95251 611 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 NPPAP01160 153 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 HIST1H2AGP0C0S8 130 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 LINC00032P0C843 101 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ADRB3P13945 408 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 HIST1H2ADP20671 130 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 PRDX3P30048 256 aaKnown RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 AKT1P31749 480 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 TNFRSF4P43489 277 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 SLC6A12P48065 614 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 PRLHRP49683 370 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ERVK-8P63133 956 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 PLOD1Q02809 727 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ZNF33BQ06732 778 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 GRB7Q14451 532 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ACOX1Q15067 660 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ZNF423Q2M1K9 1284 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ITPRIPL2Q3MIP1 535 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 GGTA1PQ4G0N0 100 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ZNF658BQ4V348 819 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 BCL7AQ4VC05 210 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 PDCD4Q53EL6 469 aaKnown RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 CMPK2Q5EBM0 449 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 LRRC73Q5JTD7 316 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 C6orf136Q5SQH8 315 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 TMEM164Q5U3C3 297 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 CES5AQ6NT32 575 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 LETMD1Q6P1Q0 360 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 SERPINA13PQ6UXR4 307 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 BNC2Q6ZN30 1099 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 Q6ZSR9 355 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ERN2Q76MJ5 926 aaKnown RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 LRRC70Q7Z2Q7 622 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 MILR1Q7Z6M3 343 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 YAF2Q8IY57 180 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 RASGEF1AQ8N9B8 481 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 PCYOX1LQ8NBM8 494 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 FBXO15Q8NCQ5 510 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 OR52B6Q8NGF0 335 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 MCOLN3Q8TDD5 553 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 ARRDC3Q96B67 414 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 HIST1H2AHQ96KK5 128 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 LINC00615Q96LM1 132 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 CDRT15Q96T59 188 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 HIST1H2AJQ99878 128 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 EGFL8Q99944 293 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 HOPXQ9BPY8 73 aaPredicted RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 TMEM79Q9BSE2 394 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 CCM2Q9BSQ5 444 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 H2AFJQ9BTM1 129 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 SLC32A1Q9H598 525 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 WDR41Q9HAD4 459 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 FBRSL1Q9HCM7 1045 aaKnown RBP8.1□□□□□ -1.11
ATXN3-235ENST00000556082 SLC52A3Q9NQ40 469 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 PRSS16Q9NQE7 514 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 HEBP1Q9NRV9 189 aa8.1□□□□□ -1.11
ATXN3-235ENST00000556082 AIG1Q9NVV5 245 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms