RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 AMACRQ9UHK6 382 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 ZNF256Q9Y2P7 627 aaPredicted RBP2.32□□□□□ -2.04
SRP54-207ENST00000555535 RUSC2Q8N2Y8 1516 aa2.32□□□□□ -2.04
SRP54-207ENST00000555535 HYKKA2RU49 373 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 SHISA7A6NL88 538 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 A8MZ25 164 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 RSL1D1O76021 490 aaKnown RBP2.31□□□□□ -2.04
SRP54-207ENST00000555535 DDHD2O94830 711 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 OR2C1O95371 312 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 SRPRAP08240 638 aaKnown RBP2.31□□□□□ -2.04
SRP54-207ENST00000555535 PRLRP16471 622 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 IL4RP24394 825 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 CSNK2BP67870 215 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 CD300CQ08708 224 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 TSTQ16762 297 aaKnown RBP2.31□□□□□ -2.04
SRP54-207ENST00000555535 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 C20orf194Q5TEA3 1177 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 CPLX4Q7Z7G2 160 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 CATSPERDQ86XM0 798 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 ARID3BQ8IVW6 561 aaPredicted RBP2.31□□□□□ -2.04
SRP54-207ENST00000555535 EID3Q8N140 333 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 ABHD12Q8N2K0 398 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 NUP37Q8NFH4 326 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 OR5M8Q8NGP6 311 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 PHLDA1Q8WV24 401 aaPredicted RBP2.31□□□□□ -2.04
SRP54-207ENST00000555535 ARSGQ96EG1 525 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 AGAP4Q96P64 663 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 OR6C1Q96RD1 312 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 CPVLQ9H3G5 476 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 FGF21Q9NSA1 209 aa2.31□□□□□ -2.04
SRP54-207ENST00000555535 TEX10Q9NXF1 929 aaPredicted RBP2.31□□□□□ -2.04
SRP54-207ENST00000555535 ZHX1Q9UKY1 873 aaPredicted RBP2.31□□□□□ -2.04
SRP54-207ENST00000555535 FRMD3A2A2Y4 597 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 ANKRD61A6NGH8 418 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 ASB14A6NK59 587 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 SSX4O60224 188 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 HS6ST1O60243 411 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 TPPPO94811 219 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 SEC24AO95486 1093 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 WDPCPO95876 746 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 CDH2P19022 906 aaPredicted RBP2.3□□□□□ -2.04
SRP54-207ENST00000555535 PON1P27169 355 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 MTHFRP42898 656 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 SUOXP51687 545 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 LYZP61626 148 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 GCNT1Q02742 428 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 FAM98BQ52LJ0 330 aaKnown RBP2.3□□□□□ -2.04
SRP54-207ENST00000555535 SPDYCQ5MJ68 293 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 KIF6Q6ZMV9 814 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 RTN4RL2Q86UN3 420 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 CEP57L1Q8IYX8 460 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 MYRIPQ8NFW9 859 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 OR1L3Q8NH93 324 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 ATP8B4Q8TF62 1192 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 LRRC15Q8TF66 581 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 SLC45A3Q96JT2 553 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 SRSF8Q9BRL6 282 aaKnown RBP2.3□□□□□ -2.04
SRP54-207ENST00000555535 OR2B2Q9GZK3 357 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 THAP2Q9H0W7 228 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 JMJD4Q9H9V9 463 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 P4HTMQ9NXG6 502 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 TAS2R14Q9NYV8 317 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 CACNG4Q9UBN1 327 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 DAPK2Q9UIK4 370 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 ZNF510Q9Y2H8 683 aa2.3□□□□□ -2.04
SRP54-207ENST00000555535 RNASEH1O60930 286 aaKnown RBP2.29□□□□□ -2.04
SRP54-207ENST00000555535 RTN3O95197 1032 aaPredicted RBP2.29□□□□□ -2.04
SRP54-207ENST00000555535 CCNDBP1O95273 360 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 HPRP00739 348 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 VTNP04004 478 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 MELTFP08582 738 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 GP9P14770 177 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 GABRB1P18505 474 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 LHCGRP22888 699 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 SLC6A6P31641 620 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 PDX1P52945 283 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 MAZP56270 477 aaKnown RBP2.29□□□□□ -2.04
SRP54-207ENST00000555535 TNIP1Q15025 636 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 HERC3Q15034 1050 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 FHL5Q5TD97 284 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 RSBN1Q5VWQ0 802 aaPredicted RBP2.29□□□□□ -2.04
SRP54-207ENST00000555535 LYSMD4Q5XG99 296 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 KLHL35Q6PF15 583 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 INTS8Q75QN2 995 aaKnown RBP2.29□□□□□ -2.04
SRP54-207ENST00000555535 COMMD2Q86X83 199 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 CPXCR1Q8N123 301 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 ARHGAP24Q8N264 748 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 PPFIBP2Q8ND30 876 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 OR11H4Q8NGC9 324 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 OR2AJ1Q8NGZ0 328 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 OR6S1Q8NH40 331 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 OR52N5Q8NH56 324 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 CHPT1Q8WUD6 406 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 GATAD1Q8WUU5 269 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 RFFLQ8WZ73 363 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 NCAPGQ9BPX3 1015 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 BTBD10Q9BSF8 475 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 DPAGT1Q9H3H5 408 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 MED20Q9H944 212 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 NDE1Q9NXR1 346 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms