RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 EID2BQ96D98 161 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 BTN2A3PQ96KV6 586 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 CORO1BQ9BR76 489 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 ATG10Q9H0Y0 220 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 ATP11BQ9Y2G3 1177 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 TMA7Q9Y2S6 64 aaKnown RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 RANBP2P49792 3224 aaKnown RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 MYO15AQ9UKN7 3530 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 H0YAE9 185 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF701M0R085 212 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 S100BP04271 92 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 LPOP22079 712 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF140P52738 457 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 PPP2R2BQ00005 443 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF846Q147U1 533 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 SLC35B4Q969S0 331 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 ISG20Q96AZ6 181 aaKnown RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 MRGBPQ9NV56 204 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 C14orf119Q9NWQ9 140 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 BOLA1Q9Y3E2 137 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 NEUROG3Q9Y4Z2 214 aa16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 GPC6Q9Y625 555 aaPredicted RBP16.69■□□□□ 0.26
PPP4R3A-208ENST00000555462 TRIM64A6NGJ6 449 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 PRAMEF11O60813 436 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 NUDT7P0C024 238 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF33AQ06730 810 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 IL10RBQ08334 325 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 TUSC3Q13454 348 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 FAM217AQ8IXS0 508 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 NLGN4XQ8N0W4 816 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 FOXJ1Q92949 421 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZHX1-C8orf76Q96EF9 292 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 SLC39A13Q96H72 371 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 BRINP2Q9C0B6 783 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 RUBCNLQ9H714 662 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 TMEFF2Q9UIK5 374 aaPredicted RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 C3orf18Q9UK00 162 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 INTS6Q9UL03 887 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 TANC1Q9C0D5 1861 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 UGT2B11O75310 529 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 PRR35P0CG20 571 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 GRSF1Q12849 480 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 OXA1LQ15070 435 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 RSPO2Q6UXX9 243 aaPredicted RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 RFLNAQ6ZTI6 216 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF551Q7Z340 670 aaPredicted RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF683Q8IZ20 524 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 PIK3C3Q8NEB9 887 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 MCFD2Q8NI22 146 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 HDAC2Q92769 488 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 PKMYT1Q99640 499 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 SEPT3Q9UH03 358 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 SAMHD1Q9Y3Z3 626 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 PCDHGA10Q9Y5H3 936 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 GBAP04062 536 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 UGT2B4P06133 528 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 HOXD9P28356 352 aaPredicted RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 OR1E2P47887 323 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 HSPA14Q0VDF9 509 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 CLCA4Q14CN2 919 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 RNF219Q5W0B1 726 aaPredicted RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 AFTPHQ6ULP2 937 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 GATAD2AQ86YP4 633 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 NKAPQ8N5F7 415 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 DMRTB1Q96MA1 342 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 RBM4BQ9BQ04 359 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 RBM4Q9BWF3 364 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZIM2Q9NZV7 527 aa16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 EIF3LQ9Y262 564 aaKnown RBP16.68■□□□□ 0.26
PPP4R3A-208ENST00000555462 CD6P30203 668 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 CLK3P49761 638 aaKnown RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 DAPP51397 102 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 CREMQ03060 361 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 PRSS55Q6UWB4 352 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 CARNMT1Q8N4J0 409 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 PAPD5Q8NDF8 572 aaKnown RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 MUL1Q969V5 352 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 REXO5Q96IC2 774 aaKnown RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 ASPSCR1Q9BZE9 553 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 GPR62Q9BZJ7 368 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 ASB8Q9H765 288 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 NLE1Q9NVX2 485 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 SCHIP1Q9P0W5 487 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF236Q9UL36 1845 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 ANKRD66B4E2M5 251 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 RFXAPO00287 272 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 MZF1P28698 734 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 ZNF135P52742 658 aaPredicted RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 DAB2P98082 770 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 VLDLRP98155 873 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 CCDC103Q8IW40 242 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 KLHDC8BQ8IXV7 354 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 UTP15Q8TED0 518 aaKnown RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 MYLIPQ8WY64 445 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 LGALS12Q96DT0 336 aa16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 REXO4Q9GZR2 422 aaKnown RBP16.67■□□□□ 0.26
PPP4R3A-208ENST00000555462 MAF1Q9H063 256 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms