RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 OR6Y1Q8NGX8 325 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 RDH11Q8TC12 318 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 LKAAEAR1Q8TD35 194 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 ATXN7L3BQ96GX2 97 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 ZNF514Q96K75 400 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-213ENST00000555386 TIMM29Q9BSF4 260 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 CCM2Q9BSQ5 444 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 CADM1Q9BY67 442 aaKnown RBP9.64□□□□□ -0.87
PSEN1-213ENST00000555386 NMUR2Q9GZQ4 415 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 C1orf21Q9H246 121 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 DCLRE1BQ9H816 532 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 DLL3Q9NYJ7 618 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 TAGLN3Q9UI15 199 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 FBXO5Q9UKT4 447 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 PADI4Q9UM07 663 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 KIF26BQ2KJY2 2108 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 PRAMEF33A0A0G2JMD5 474 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 MGAT4DA6NG13 374 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 RHPN2P1A8MT19 583 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 AGRPO00253 132 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 PRMT5O14744 637 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 PFDN6O15212 129 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 TNFSF14O43557 240 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 NOBOXO60393 691 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 PEX11AO75192 247 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 NIPSNAP2O75323 286 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 KLHL2O95198 593 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 FTH1P19P0C7X4 201 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 COL6A2P12110 1019 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CEACAM1P13688 526 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CPA3P15088 417 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CKMT2P17540 419 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CSRP1P21291 193 aaKnown RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 IDSP22304 550 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 MAPK9P45984 424 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 RPIAP49247 311 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CSRP3P50461 194 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 ILF2Q12905 390 aaKnown RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 DNAL1Q4LDG9 190 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 BCL7AQ4VC05 210 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 C14orf28Q4W4Y0 310 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 PERM1Q5SV97 790 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CES4AQ5XG92 561 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 DUS1LQ6P1R4 473 aaKnown RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CNSTQ6PJW8 725 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 DGLUCYQ7Z3D6 616 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 SLCO6A1Q86UG4 719 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CNTN4Q8IWV2 1026 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 NAGSQ8N159 534 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 TEX9Q8N6V9 391 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 OR2L2Q8NH16 312 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 IFI44Q8TCB0 444 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 MAPK15Q8TD08 544 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CALML6Q8TD86 181 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 SLC37A2Q8TED4 501 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 STON2Q8WXE9 905 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 JPH3Q8WXH2 748 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CCDC74AQ96AQ1 378 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 MCUR1Q96AQ8 359 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 RSRC1Q96IZ7 334 aaKnown RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 MIPEPQ99797 713 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 FAM167BQ9BTA0 163 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 CCDC106Q9BWC9 280 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 IMP3Q9NV31 184 aaKnown RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 SCHIP1Q9P0W5 487 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 LRIT1Q9P2V4 623 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 GNPTGQ9UJJ9 305 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 WDR37Q9Y2I8 494 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 L3MBTL1Q9Y468 752 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 RNF215Q9Y6U7 377 aa9.63□□□□□ -0.87
PSEN1-213ENST00000555386 COL5A1P20908 1838 aaPredicted RBP9.63□□□□□ -0.87
PSEN1-213ENST00000555386 LY6G6EA0A0G2JKS1 128 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 E5RI56 91 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 AP2A2O94973 939 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 S1PR4O95977 384 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 FTH1P02794 183 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 SLC35G4P0C7Q5 338 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 CKMT1AP12532 417 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 GNAZP19086 355 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 CHRM3P20309 590 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 OGNP20774 298 aaKnown RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 SAT1P21673 171 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 PDHA2P29803 388 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 ALDH4A1P30038 563 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 GCKP35557 465 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 DUSP3P51452 185 aaPredicted RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 RAP1GDS1P52306 607 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 ABCE1P61221 599 aaKnown RBP9.62□□□□□ -0.87
PSEN1-213ENST00000555386 HSPA14Q0VDF9 509 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 KRT33BQ14525 404 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 CLCA4Q14CN2 919 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 TYSND1Q2T9J0 566 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 AMZ1Q400G9 498 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 CMPK2Q5EBM0 449 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 CTSL3PQ5NE16 218 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 C16orf46Q6P387 395 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 TLDC1Q6P9B6 456 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 DHRS13Q6UX07 377 aa9.62□□□□□ -0.87
PSEN1-213ENST00000555386 SDR16C5Q8N3Y7 309 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms