RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SF3A3Q12874 501 aaKnown RBP eCLIP17.19■□□□□ 0.34
PSEN1-212ENST00000555254 METTL2BQ6P1Q9 378 aaKnown RBP17.19■□□□□ 0.34
PSEN1-212ENST00000555254 Q6ZSR6 202 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 FRMD7Q6ZUT3 714 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 CHST15Q7LFX5 561 aaPredicted RBP17.19■□□□□ 0.34
PSEN1-212ENST00000555254 PDPRQ8NCN5 879 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 PIWIL2Q8TC59 973 aaKnown RBP17.19■□□□□ 0.34
PSEN1-212ENST00000555254 MAGEC3Q8TD91 643 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 ATL1Q8WXF7 558 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
PSEN1-212ENST00000555254 FAR2Q96K12 515 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 KLQ9UEF7 1012 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 SUFUQ9UMX1 484 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 PDE10AQ9Y233 779 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 STK38LQ9Y2H1 464 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 CEP192Q8TEP8 1941 aa17.19■□□□□ 0.34
PSEN1-212ENST00000555254 TNRC6BQ9UPQ9 1833 aaKnown RBP17.19■□□□□ 0.34
PSEN1-212ENST00000555254 PSIP1O75475 530 aaKnown RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 SLC35G4P0C7Q5 338 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 THEGLP0DJG4 465 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 ACP5P13686 325 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 IDSP22304 550 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 PIK3CGP48736 1102 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 HNMTP50135 292 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 RPL14P50914 215 aaKnown RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 ARFIP2P53365 341 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 NXPH1P58417 271 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 GALNT1Q10472 559 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 NFE2L1Q14494 772 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 PCBP2Q15366 365 aaKnown RBP eCLIP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 PHKG1Q16816 387 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 PPP1R3AQ16821 1122 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 PYCR3Q53H96 274 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 CES4AQ5XG92 561 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 METRNLQ641Q3 311 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 GCNT7Q6ZNI0 430 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 ZNF771Q7L3S4 317 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 C11orf96Q7Z7L8 435 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 DCP2Q8IU60 420 aaKnown RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 TMEM145Q8NBT3 493 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 SCARF2Q96GP6 870 aaPredicted RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 CCDC138Q96M89 665 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 OR2M4Q96R27 311 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 CARS2Q9HA77 564 aaKnown RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 KLC4Q9NSK0 619 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 VTI1BQ9UEU0 232 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 DCTN4Q9UJW0 460 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 PTBP2Q9UKA9 531 aaKnown RBP17.18■□□□□ 0.34
PSEN1-212ENST00000555254 RALGAPA1Q6GYQ0 2036 aa17.18■□□□□ 0.34
PSEN1-212ENST00000555254 LAMA1P25391 3075 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 PRSS38A1L453 326 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 EBAG9O00559 213 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 CRCPO75575 148 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 SIX3O95343 332 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-212ENST00000555254 TNFP01375 233 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 PDHA2P29803 388 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 CLCQ05315 142 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 DMPKQ09013 629 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 RBBP7Q16576 425 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 ZNF658BQ4V348 819 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-212ENST00000555254 UNC5DQ6UXZ4 953 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 ABI3BPQ7Z7G0 1075 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 SPATS2Q86XZ4 545 aaKnown RBP17.17■□□□□ 0.34
PSEN1-212ENST00000555254 LILRA3Q8N6C8 439 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-212ENST00000555254 OR13H1Q8NG92 308 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 SORT1Q99523 831 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 HGH1Q9BTY7 390 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 C1QTNF3Q9BXJ4 246 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 C20orf27Q9GZN8 174 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 OSGEPL1Q9H4B0 414 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 GSTO2Q9H4Y5 243 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 ACSS2Q9NR19 701 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 TM7SF3Q9NS93 570 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 DNAAF2Q9NVR5 837 aaKnown RBP17.17■□□□□ 0.34
PSEN1-212ENST00000555254 PNPOQ9NVS9 261 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 KCNK4Q9NYG8 393 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 OPTCQ9UBM4 332 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 MARCOQ9UEW3 520 aaPredicted RBP17.17■□□□□ 0.34
PSEN1-212ENST00000555254 SLC23A2Q9UGH3 650 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 APOBEC2Q9Y235 224 aaKnown RBP17.17■□□□□ 0.34
PSEN1-212ENST00000555254 USH1CQ9Y6N9 552 aa17.17■□□□□ 0.34
PSEN1-212ENST00000555254 A0A0G2JND7 137 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 CCNT2O60583 730 aaKnown RBP17.16■□□□□ 0.34
PSEN1-212ENST00000555254 CHRNGP07510 517 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 RPS17P08708 135 aaKnown RBP17.16■□□□□ 0.34
PSEN1-212ENST00000555254 MPSTP25325 297 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 AGTR2P50052 363 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 SRP54P61011 504 aaKnown RBP17.16■□□□□ 0.34
PSEN1-212ENST00000555254 CGB2Q6NT52 195 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 FAM83HQ6ZRV2 1179 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-212ENST00000555254 RD3Q7Z3Z2 195 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 PDZD3Q86UT5 571 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 IQCHQ86VS3 1027 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 HOMEZQ8IX15 550 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 TRPC4APQ8TEL6 797 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 ZNF483Q8TF39 744 aaPredicted RBP17.16■□□□□ 0.34
PSEN1-212ENST00000555254 UBTD2Q8WUN7 234 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 OR1E3Q8WZA6 343 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 DLG3Q92796 817 aa17.16■□□□□ 0.34
PSEN1-212ENST00000555254 ATP6V1E2Q96A05 226 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms