RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 RAD51Q06609 339 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 PIGFQ07326 219 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 TAF1AQ15573 450 aaPredicted RBP10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 MAPK11Q15759 364 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 CATSPEREQ5SY80 951 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 AGAP6Q5VW22 663 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 TMEM236Q5W0B7 351 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 USP43Q70EL4 1123 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 B3GNT8Q7Z7M8 397 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 GPR149Q86SP6 731 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 SIMC1Q8NDZ2 872 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 OVCA2Q8WZ82 227 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 EXT2Q93063 718 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 SLC38A4Q969I6 547 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 NSUN5Q96P11 429 aaKnown RBP10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 AGAP4Q96P64 663 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 ZNF382Q96SR6 550 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 SEPT5Q99719 369 aaPredicted RBP10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 MKLN1Q9UL63 735 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 RNF112Q9ULX5 631 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 USP22Q9UPT9 525 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 GRIP1Q9Y3R0 1128 aa10.47□□□□□ -0.73
MTHFD1-210ENST00000555252 ELOVL7A1L3X0 281 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 OR2A25A4D2G3 310 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 C2orf81A6NN90 581 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 SLC38A8A6NNN8 435 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 MUSKO15146 869 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 NOBOXO60393 691 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 NDUFS3O75489 264 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 CLDN11O75508 207 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 APOA1P02647 267 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 S100BP04271 92 aaPredicted RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 PCNAP12004 261 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 PSMB9P28065 219 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ATP5C1P36542 298 aaKnown RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ZNF140P52738 457 aaPredicted RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ARPP19P56211 112 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 CHRNEQ04844 493 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 GALNT3Q14435 633 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 MBTPS1Q14703 1052 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 EML3Q32P44 896 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 STEAP3Q658P3 488 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 IL31Q6EBC2 164 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 RNF165Q6ZSG1 346 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ANKS3Q6ZW76 656 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 LRRC8DQ7L1W4 858 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 RALGPS2Q86X27 583 aaPredicted RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 CIR1Q86X95 450 aaPredicted RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 SNX29P2Q8IUI4 249 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 FAM126BQ8IXS8 530 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 RYBPQ8N488 228 aaPredicted RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 TTC9BQ8N6N2 239 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 FNDC5Q8NAU1 212 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 GLB1L3Q8NCI6 653 aaPredicted RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 OR7G1Q8NGA0 311 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 OR13C4Q8NGS5 318 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 GPR152Q8TDT2 470 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 TP53INP1Q96A56 240 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 RHBDF1Q96CC6 855 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 SIGLEC11Q96RL6 698 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 TMEM175Q9BSA9 504 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 C17orf80Q9BSJ5 609 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ITPAQ9BY32 194 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 DCSTAMPQ9H295 470 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ABCB10Q9NRK6 738 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 DCAF13Q9NV06 445 aaKnown RBP10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ERVK-18Q9QC07 812 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 LIMD1Q9UGP4 676 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 RAPGEFL1Q9UHV5 662 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 ZNF221Q9UK13 617 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 PCTPQ9UKL6 214 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 PCDHB7Q9Y5E2 793 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 COMMD10Q9Y6G5 202 aa10.46□□□□□ -0.73
MTHFD1-210ENST00000555252 TMEM88BA6NKF7 163 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 FAM220BPB1ANY3 271 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 INSIG1O15503 277 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 HOXA2O43364 376 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 MED26O95402 600 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 TRAPPC2P0DI81 140 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 TRAPPC2BP0DI82 140 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 PCSK2P16519 638 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 IGFBP5P24593 272 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 HOXD9P28356 352 aaPredicted RBP10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 S100A5P33763 92 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 TGFBR2P37173 567 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 MAGEA2P43356 314 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 PPP3CCP48454 512 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 MTPNP58546 118 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 NCS1P62166 190 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 RAPSNQ13702 412 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 SEMA3AQ14563 771 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 ATG9BQ674R7 924 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 FUT10Q6P4F1 479 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 GPRIN3Q6ZVF9 776 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 CHST9Q7L1S5 443 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 VASH1Q7L8A9 365 aaPredicted RBP10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 TAS2R42Q7RTR8 314 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 SYVN1Q86TM6 617 aa10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 TSPYL5Q86VY4 417 aaPredicted RBP10.46□□□□□ -0.74
MTHFD1-210ENST00000555252 CARNMT1Q8N4J0 409 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms