RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 GPR21Q99679 349 aa10.63□□□□□ -0.71
SHMT2-218ENST00000555213 SLC40A1Q9NP59 571 aa10.63□□□□□ -0.71
SHMT2-218ENST00000555213 LATS2Q9NRM7 1088 aa10.63□□□□□ -0.71
SHMT2-218ENST00000555213 ZNF624Q9P2J8 865 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-218ENST00000555213 RUVBL2Q9Y230 463 aaKnown RBP10.63□□□□□ -0.71
SHMT2-218ENST00000555213 ASF1AQ9Y294 204 aa10.63□□□□□ -0.71
SHMT2-218ENST00000555213 ACOT9Q9Y305 439 aa10.63□□□□□ -0.71
SHMT2-218ENST00000555213 CFAP20Q9Y6A4 193 aaKnown RBP10.63□□□□□ -0.71
SHMT2-218ENST00000555213 WDR87Q6ZQQ6 2873 aa10.63□□□□□ -0.71
SHMT2-218ENST00000555213 PABPN1LA6NDY0 278 aaKnown RBP10.62□□□□□ -0.71
SHMT2-218ENST00000555213 G3V2L1 256 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 GPC4O75487 556 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 KLHL2O95198 593 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 CBSLP0DN79 551 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 CBSP35520 551 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 SLC19A1P41440 591 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 GPR18Q14330 331 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 CLPPQ16740 277 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-218ENST00000555213 PERM1Q5SV97 790 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 DUS1LQ6P1R4 473 aaKnown RBP10.62□□□□□ -0.71
SHMT2-218ENST00000555213 PAQR3Q6TCH7 311 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 NAPRTQ6XQN6 538 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 TMEM26Q6ZUK4 368 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 DCUN1D3Q8IWE4 304 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 TBC1D21Q8IYX1 336 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 RAB42Q8N4Z0 105 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 ARMC2Q8NEN0 867 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 GIMAP7Q8NHV1 300 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 CD200R1Q8TD46 325 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 CABS1Q96KC9 395 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 FERD3LQ96RJ6 166 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 GFM1Q96RP9 751 aaKnown RBP10.62□□□□□ -0.71
SHMT2-218ENST00000555213 DPYSL5Q9BPU6 564 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 HGH1Q9BTY7 390 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 KIR3DX1Q9H7L2 352 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 TOR4AQ9NXH8 423 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 NKIRAS1Q9NYS0 192 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-218ENST00000555213 POLG2Q9UHN1 485 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 IKZF3Q9UKT9 509 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 DHRS7Q9Y394 339 aa10.62□□□□□ -0.71
SHMT2-218ENST00000555213 CNOT1A5YKK6 2376 aaKnown RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 FRYLO94915 3013 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ARID1BQ8NFD5 2236 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 A0A087X1B8 175 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 MED19A0JLT2 244 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 WDR91A4D1P6 747 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 SRRM3A6NNA2 597 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 PPM1DO15297 605 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 GLRA3O75311 464 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 DKK1O94907 266 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 CPNE6O95741 557 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 TSPAN12O95859 305 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 CATP04040 527 aaKnown RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 BPGMP07738 259 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 AMD1P17707 334 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 SLC26A3P40879 764 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 SERPINB4P48594 390 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 IL2P60568 153 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 TUBB8Q3ZCM7 444 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 AMZ1Q400G9 498 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ACSBG2Q5FVE4 666 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ARMC6Q6NXE6 501 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 DHRS13Q6UX07 377 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 XKR5Q6UX68 686 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 CYHR1Q6ZMK1 362 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 RBM44Q6ZP01 1051 aaKnown RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 RGS9BPQ6ZS82 235 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 NEK10Q6ZWH5 1172 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ISCA2Q86U28 154 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ZNF761Q86XN6 746 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 CPNE9Q8IYJ1 553 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 MYO1HQ8N1T3 1032 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 GALNT15Q8N3T1 639 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 OR5K2Q8NHB8 316 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 CFAP61Q8NHU2 1237 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 MAGEC3Q8TD91 643 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 LCN9Q8WX39 176 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ADAMTS14Q8WXS8 1223 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ZNF75CPQ92670 426 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 MAGEB18Q96M61 343 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 DEPDC7Q96QD5 511 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 LRRN3Q9H3W5 708 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 POPDC3Q9HBV1 291 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 SYTL2Q9HCH5 934 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 TSR3Q9UJK0 312 aaKnown RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 TLK1Q9UKI8 766 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 CDYLQ9Y232 598 aa10.61□□□□□ -0.71
SHMT2-218ENST00000555213 GOLGA4Q13439 2230 aaKnown RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 ZFC3H1O60293 1989 aaKnown RBP10.61□□□□□ -0.71
SHMT2-218ENST00000555213 IGHV1OR21-1A0A087WYE8 117 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 FAM221BA6H8Z2 402 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 GMNCA6NCL1 334 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 D6RAR5 112 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 TMX2-CTNND1H3BSU7 103 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 BIRC5O15392 142 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 UBXN7O94888 489 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 CCDC166P0CW27 439 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 MPC1LP0DKB6 136 aa10.6□□□□□ -0.71
SHMT2-218ENST00000555213 CD1DP15813 335 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms