RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 ANXA5P08758 320 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 CA5AP35218 305 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 OPRL1P41146 370 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 ACLYP53396 1101 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 IRF8Q02556 426 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 CACNG1Q06432 222 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 RAPSNQ13702 412 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 TMEM132CQ8N3T6 1108 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 PACRGLQ8N7B6 248 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 WFDC5Q8TCV5 224 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 HPS1Q92902 700 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 BARD1Q99728 777 aaKnown RBP11.6□□□□□ -0.55
XRCC3-208ENST00000554811 NUSAP1Q9BXS6 441 aaKnown RBP11.6□□□□□ -0.55
XRCC3-208ENST00000554811 SACM1LQ9NTJ5 587 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 NUDT4Q9NZJ9 180 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 ZIM2Q9NZV7 527 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 GNPTGQ9UJJ9 305 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 PADI4Q9UM07 663 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 OR7A17O14581 309 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 STC2O76061 302 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 FAM163BP0C2L3 166 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 RXRGP48443 463 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 PPM1FP49593 454 aaPredicted RBP11.6□□□□□ -0.55
XRCC3-208ENST00000554811 NCS1P62166 190 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 RPS14P62263 151 aaKnown RBP11.6□□□□□ -0.55
XRCC3-208ENST00000554811 C6orf141Q5SZD1 244 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 AFMIDQ63HM1 303 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 SUSD1Q6UWL2 747 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 HEATR4Q86WZ0 1026 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 IFNL1Q8IU54 200 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 RBFAQ8N0V3 343 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 MFSD2AQ8NA29 543 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 KLHL23Q8NBE8 558 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 MAL2Q969L2 176 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 ZNF382Q96SR6 550 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 ACAT2Q9BWD1 397 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 ELOVL2Q9NXB9 296 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 PCDHB14Q9Y5E9 798 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 PDCD11Q14690 1871 aaKnown RBP11.6□□□□□ -0.55
XRCC3-208ENST00000554811 MYLKQ15746 1914 aa11.6□□□□□ -0.55
XRCC3-208ENST00000554811 PIKFYVEQ9Y2I7 2098 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 A8MU76 341 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 OAZ2O95190 189 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 BCKDHAP12694 445 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 HLCSP50747 726 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 ARF5P84085 180 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 STARD3Q14849 445 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 PON2Q15165 354 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 TTLL9Q3SXZ7 439 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 CROCCP3Q8IVE0 287 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 CLIP4Q8N3C7 705 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 PCSK9Q8NBP7 692 aaKnown RBP11.59□□□□□ -0.55
XRCC3-208ENST00000554811 PIK3C3Q8NEB9 887 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 TBC1D15Q8TC07 691 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 RPL3LQ92901 407 aaKnown RBP11.59□□□□□ -0.55
XRCC3-208ENST00000554811 ACDQ96AP0 544 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 TAMM41Q96BW9 452 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 SPATA17Q96L03 361 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 ZNF583Q96ND8 569 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 MGME1Q9BQP7 344 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 DNAJB9Q9UBS3 223 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 CPQQ9Y646 472 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 PNMA8CA0A1B0GUJ8 204 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 SYNDIG1LA6NDD5 238 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
XRCC3-208ENST00000554811 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.59□□□□□ -0.55
XRCC3-208ENST00000554811 LSM1O15116 133 aaKnown RBP11.59□□□□□ -0.55
XRCC3-208ENST00000554811 NDUFS2O75306 463 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 PDYNP01213 254 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 UMPSP11172 480 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 CRATP43155 626 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 CSRP3P50461 194 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 ADGRF1Q5T601 910 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 TMEM179BQ7Z7N9 219 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 RBM23Q86U06 439 aaKnown RBP11.59□□□□□ -0.55
XRCC3-208ENST00000554811 STON2Q8WXE9 905 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 KCNJ9Q92806 393 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 SCAMP4Q969E2 229 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 KCNC2Q96PR1 638 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 HERC2P3Q9BVR0 1158 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 SH3GLB1Q9Y371 365 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 KDELR3O43731 214 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 HTR1EP28566 365 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 CDKN2CP42773 168 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 OR1E2P47887 323 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 MBTPS1Q14703 1052 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 INAQ16352 499 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 SYTL3Q4VX76 610 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 PDCD4Q53EL6 469 aaKnown RBP11.59□□□□□ -0.55
XRCC3-208ENST00000554811 XKR6Q5GH73 641 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 C11orf96Q7Z7L8 435 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 TEX26Q8N6G2 289 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 NDNFQ8TB73 568 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 SLC22A17Q8WUG5 538 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 MARCH7Q9H992 704 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 KRT84Q9NSB2 600 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 TSC22D4Q9Y3Q8 395 aa11.59□□□□□ -0.55
XRCC3-208ENST00000554811 OR6C75A6NL08 312 aa11.58□□□□□ -0.55
XRCC3-208ENST00000554811 STX16O14662 325 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms