RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ZC3H3Q8IXZ2 948 aaKnown RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CFAP206Q8IYR0 622 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF384Q8TF68 577 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CRELD1Q96HD1 420 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CHIAQ9BZP6 476 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 BCAS3Q9H6U6 928 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 AFDNP55196 1824 aaKnown RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 PRKD3O94806 890 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CFHP08603 1231 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 UGT1A6P19224 532 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 UGT1A1P22309 533 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 UGT1A4P22310 534 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 UGT1A3P35503 534 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 SP3Q02447 781 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 HSPB3Q12988 150 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 SYPL2Q5VXT5 272 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 ADNP2Q6IQ32 1131 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 PAQR3Q6TCH7 311 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 TMEM192Q8IY95 271 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 BCO2Q9BYV7 579 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 HIPK3Q9H422 1215 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 MALT1Q9UDY8 824 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 PHF24Q9UPV7 400 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 FAM163BP0C2L3 166 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 IFI30P13284 250 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 KHKP50053 298 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 PDE12Q6L8Q7 609 aaKnown RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 FUT10Q6P4F1 479 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 MSANTD1Q6ZTZ1 278 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 ERMP1Q7Z2K6 904 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 OR10G2Q8NGC3 310 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 C7orf43Q8WVR3 580 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 TMBIM1Q969X1 311 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 ZC3H10Q96K80 434 aaKnown RBP13.69□□□□□ -0.22
VTI1B-204ENST00000554659 TBC1D17Q9HA65 648 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 CD84Q9UIB8 345 aa13.69□□□□□ -0.22
VTI1B-204ENST00000554659 XKRYO14609 159 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 ECI2O75521 394 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PRH1P02810 166 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 SELPP16109 830 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 CMPK1P30085 196 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 CLCN4P51793 760 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 NRLP54845 237 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 GPR33Q49SQ1 333 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 MSANTD2Q6P1R3 559 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 GLIS1Q8NBF1 620 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 SMG8Q8ND04 991 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 SLC35G5Q96KT7 338 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 C12orf42Q96LP6 360 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 UCKL1Q9NWZ5 548 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 EIF3KQ9UBQ5 218 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 NR2E3Q9Y5X4 410 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PRORSD1PA6NEY8 169 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PDPK1O15530 556 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 IST1P53990 364 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 NFKB2Q00653 900 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 POMZP3Q6PJE2 187 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 C2orf73Q8N5S3 287 aaPredicted RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 STON2Q8WXE9 905 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 SNTG1Q9NSN8 517 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 COLEC10Q9Y6Z7 277 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 H3BSA7 217 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PDLIM1O00151 329 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 FAM189A1O60320 539 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 SMPD1P17405 629 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 MAGEA2P43356 314 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 DCDC1P59894 354 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 ARF3P61204 181 aaPredicted RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 ARF1P84077 181 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 ZNF155Q12901 538 aaPredicted RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 FAAH2Q6GMR7 532 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 OXR1Q8N573 874 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 OR13C4Q8NGS5 318 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 ZBED6CLQ96FA7 236 aaPredicted RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 C5orf34Q96MH7 638 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 ZFP3Q96NJ6 502 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 DEC1Q9P2X7 70 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 KDM4BO94953 1096 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 SRPRAP08240 638 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 TFPIP10646 304 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 VARSP26640 1264 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 OR2B6P58173 313 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 FBXO43Q4G163 708 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PHTF2Q8N3S3 785 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 ERMAPQ96PL5 475 aaPredicted RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 HEPHQ9BQS7 1158 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 POLR2J2Q9GZM3 115 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 SMURF2Q9HAU4 748 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PIGVQ9NUD9 493 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 THUMPD1Q9NXG2 353 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 TVP23BQ9NYZ1 205 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 TMEM9Q9P0T7 183 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 DUSP11O75319 330 aaKnown RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PAPSS2O95340 614 aaPredicted RBP13.68□□□□□ -0.22
VTI1B-204ENST00000554659 GSK3BP49841 420 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 PITPNAQ00169 270 aa13.68□□□□□ -0.22
VTI1B-204ENST00000554659 OGDHQ02218 1023 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms