RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 HSPH1Q92598 858 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 FUBP1Q96AE4 644 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 FAF2Q96CS3 445 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ECHDC3Q96DC8 303 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 CNDP2Q96KP4 475 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 BMFQ96LC9 184 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 LENG8Q96PV6 779 aaPredicted RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 CSPG4P5Q96PW8 444 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 TRIB1Q96RU8 372 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 NCAPGQ9BPX3 1015 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 SPATA5L1Q9BVQ7 753 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 C1orf43Q9BWL3 253 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 TSPY26PQ9H489 355 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ETNK2Q9NVF9 386 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 MRPS18AQ9NVS2 196 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ASB6Q9NWX5 421 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 DONSONQ9NYP3 566 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 IP6K2Q9UHH9 426 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 IPO11Q9UI26 975 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 ANAPC7Q9UJX3 599 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 HPCAL4Q9UM19 191 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PCDHGA1Q9Y5H4 931 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PCDHA3Q9Y5H8 950 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.16□□□□□ -1.743e-7■■□□□ 13.2
VTI1B-203ENST00000554636 CFAP20Q9Y6A4 193 aaKnown RBP4.16□□□□□ -1.74
VTI1B-203ENST00000554636 PKD1L2Q7Z442 2459 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 DMXL2Q8TDJ6 3036 aa4.16□□□□□ -1.74
VTI1B-203ENST00000554636 MYLKQ15746 1914 aa4.15□□□□□ -1.74
VTI1B-203ENST00000554636 CELSR3Q9NYQ7 3312 aa4.15□□□□□ -1.74
VTI1B-203ENST00000554636 LY6G6EA0A0G2JKS1 128 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 A0A1W2PS29 197 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TMEM8BA6NDV4 472 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 E9PLN8 166 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TAF4O00268 1085 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 DFFAO00273 331 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TRIM38O00635 465 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TRAFD1O14545 582 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 VPS4BO75351 444 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PIAS2O75928 621 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TM7SF2O76062 418 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 RNF8O76064 485 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SUN1O94901 812 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PROSCO94903 275 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SNUPNO95149 360 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 LDOC1O95751 146 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 IL33O95760 270 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PAK4O96013 591 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PRKCGP05129 697 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CD48P09326 243 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PPP3CBP16298 524 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 GM2AP17900 193 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 IL4RP24394 825 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 MAN1A1P33908 653 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 HSPA9P38646 679 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 MMP12P39900 470 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 RABIFP47224 123 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CSNK1DP48730 415 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 ARRB1P49407 418 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SUOXP51687 545 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CLDN6P56747 220 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 DSC2Q02487 901 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 RAD51Q06609 339 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PIGFQ07326 219 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 IL10RBQ08334 325 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SLC10A7Q0GE19 358 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 EIF2B5Q13144 721 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TBX2Q13207 712 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 DNAJC3Q13217 504 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TRIM14Q14142 442 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 DPYSL3Q14195 570 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 FZD2Q14332 565 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 RFTN1Q14699 578 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 GRM3Q14832 879 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 IRF4Q15306 451 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SMAD1Q15797 465 aaKnown RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SLC18A3Q16572 532 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 WSCD2Q2TBF2 565 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 TMEM52BQ4KMG9 183 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 BOLA3Q53S33 107 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 ZNF542PQ5EBM4 170 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CCDC122Q5T0U0 273 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 NCBP2-AS2Q69YL0 99 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SPECC1LQ69YQ0 1117 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 DHRS13Q6UX07 377 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SRLQ86TD4 932 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 VPS36Q86VN1 386 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 MARCH9Q86YJ5 346 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 ADGRG5Q8IZF4 528 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SLC25A45Q8N413 288 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 PGBD5Q8N414 524 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 OR4C6Q8NH72 309 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 HCAR2Q8TDS4 363 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CXorf40AQ8TE69 158 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 NTN5Q8WTR8 489 aaPredicted RBP4.15□□□□□ -1.75
VTI1B-203ENST00000554636 SLC9A6Q92581 669 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 MAML1Q92585 1016 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 CENPTQ96BT3 561 aa4.15□□□□□ -1.75
VTI1B-203ENST00000554636 FEM1CQ96JP0 617 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms