RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TK2O00142 265 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 TTI1O43156 1089 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 LIFP15018 202 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 FOLR1P15328 257 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 PRDX3P30048 256 aaKnown RBP12.66□□□□□ -0.38
SHMT2-211ENST00000554310 ECHS1P30084 290 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 STAT5AP42229 794 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 PTGIRP43119 386 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 KCNAB1Q14722 419 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 CTSL3PQ5NE16 218 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 ZNF470Q6ECI4 717 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 NEPROQ6NW34 567 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 OTOAQ7RTW8 1153 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 TIPARPQ7Z3E1 657 aaKnown RBP12.66□□□□□ -0.38
SHMT2-211ENST00000554310 CILP2Q8IUL8 1156 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 DCUN1D3Q8IWE4 304 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 ADGRF3Q8IZF5 1079 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 STAMBPL1Q96FJ0 436 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 BIRC8Q96P09 236 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 TRIM56Q9BRZ2 755 aaKnown RBP12.66□□□□□ -0.38
SHMT2-211ENST00000554310 XKR8Q9H6D3 395 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 GPN2Q9H9Y4 310 aaPredicted RBP12.66□□□□□ -0.38
SHMT2-211ENST00000554310 FANCEQ9HB96 536 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 ACTR10Q9NZ32 417 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 LNPEPQ9UIQ6 1025 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 TDRKHQ9Y2W6 561 aaKnown RBP12.66□□□□□ -0.38
SHMT2-211ENST00000554310 MAD1L1Q9Y6D9 718 aa12.66□□□□□ -0.38
SHMT2-211ENST00000554310 COL6A6A6NMZ7 2263 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 FASNP49327 2511 aaKnown RBP12.65□□□□□ -0.38
SHMT2-211ENST00000554310 PIPSLA2A3N6 862 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 SLC9B1P1A6NJY1 282 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 EIF4E1BA6NMX2 242 aaKnown RBP12.65□□□□□ -0.38
SHMT2-211ENST00000554310 MAP3K7O43318 606 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 SPAG6O75602 509 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 KIAA0754O94854 1291 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 MT-ND3P03897 115 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 ITGB2P05107 769 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 FAM153BP0C7A2 387 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 MSL3P1P0C860 447 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 ZNF28P17035 718 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 PGAM1P18669 254 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 ATP5DP30049 168 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 PKLRP30613 574 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 RAB28P51157 221 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 THOC5Q13769 683 aaKnown RBP12.65□□□□□ -0.38
SHMT2-211ENST00000554310 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 FAM153CQ494X1 144 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 PLEKHS1Q5SXH7 462 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 KIAA1614Q5VZ46 1190 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 IZUMO3Q5VZ72 239 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 DUPD1Q68J44 220 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 SPESP1Q6UW49 350 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 C6orf15Q6UXA7 325 aaPredicted RBP12.65□□□□□ -0.38
SHMT2-211ENST00000554310 UNC5AQ6ZN44 842 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 CENPUQ71F23 418 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 VRK3Q8IV63 474 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 AGGF1Q8N302 714 aaeCLIP12.65□□□□□ -0.38
SHMT2-211ENST00000554310 CALML6Q8TD86 181 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 TTC9Q92623 222 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 ELMO2Q96JJ3 720 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 SIGLEC10Q96LC7 697 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 PPM1MQ96MI6 270 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 ERP44Q9BS26 406 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 FAM167BQ9BTA0 163 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 TWSG1Q9GZX9 223 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 SYTL2Q9HCH5 934 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 LATS2Q9NRM7 1088 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 ATMQ13315 3056 aa12.65□□□□□ -0.38
SHMT2-211ENST00000554310 SNRNP200O75643 2136 aaKnown RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 ZNF891A8MT65 544 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 AGPSO00116 658 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 SMAPO00193 183 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 NIPSNAP2O75323 286 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 SYF2O95926 243 aaKnown RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 CHRM5P08912 532 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 ST6GAL1P15907 406 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 UGT2B7P16662 529 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 WT1P19544 449 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 FMO4P31512 558 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 KIR2DS3Q14952 304 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 MORF4L2Q15014 288 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 TERF2Q15554 542 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 GLIPR1L2Q4G1C9 344 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 TAF1BQ53T94 588 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 PCSK4Q6UW60 755 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 GALNT6Q8NCL4 622 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 SLC39A7Q92504 469 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 ZNF501Q96CX3 271 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 SLC45A3Q96JT2 553 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 SH3GL2Q99962 352 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 NAT9Q9BTE0 207 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 RAB11FIP5Q9BXF6 653 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 FAM129AQ9BZQ8 928 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 C20orf96Q9NUD7 363 aaPredicted RBP12.64□□□□□ -0.39
SHMT2-211ENST00000554310 IL1RAPL1Q9NZN1 696 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 CRYL1Q9Y2S2 319 aa12.64□□□□□ -0.39
SHMT2-211ENST00000554310 LOC101059948A0A1B0GTJ6 334 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 E5RI56 91 aa12.63□□□□□ -0.39
SHMT2-211ENST00000554310 POLR3GO15318 223 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms