RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 RAB6BQ9NRW1 208 aa18.1■□□□□ 0.49
CPSF2-203ENST00000554290 IRAK4Q9NWZ3 460 aa18.1■□□□□ 0.49
CPSF2-203ENST00000554290 IFT80Q9P2H3 777 aaPredicted RBP18.1■□□□□ 0.49
CPSF2-203ENST00000554290 SLC2A6Q9UGQ3 507 aa18.1■□□□□ 0.49
CPSF2-203ENST00000554290 ANAPC5Q9UJX4 755 aa18.1■□□□□ 0.49
CPSF2-203ENST00000554290 PLCL2Q9UPR0 1127 aa18.1■□□□□ 0.49
CPSF2-203ENST00000554290 CAPN6Q9Y6Q1 641 aa18.1■□□□□ 0.49
CPSF2-203ENST00000554290 COL12A1Q99715 3063 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 A0A0U1RQJ8 604 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 H3BMH7 237 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 KLF7O75840 302 aaPredicted RBP18.09■□□□□ 0.49
CPSF2-203ENST00000554290 CBSLP0DN79 551 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 OTX2P32243 289 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 CBSP35520 551 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 CSE1LP55060 971 aaKnown RBP18.09■□□□□ 0.49
CPSF2-203ENST00000554290 HSPA14Q0VDF9 509 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 AARS2Q5JTZ9 985 aaKnown RBP18.09■□□□□ 0.49
CPSF2-203ENST00000554290 C1orf189Q5VU69 101 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 JMJD6Q6NYC1 403 aaPredicted RBP18.09■□□□□ 0.49
CPSF2-203ENST00000554290 SLC22A15Q8IZD6 547 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 FLVCR1-AS1Q8TAF5 88 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 PEX13Q92968 403 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 SLC22A18Q96BI1 424 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 FER1L6-AS2Q96M78 137 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 NDC1Q9BTX1 674 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 NUDT9Q9BW91 350 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 CARD6Q9BX69 1037 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 SLAMF7Q9NQ25 335 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 CASS4Q9NQ75 786 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 NDOR1Q9UHB4 597 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 PLAGL1Q9UM63 463 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 MAP4K5Q9Y4K4 846 aa18.09■□□□□ 0.49
CPSF2-203ENST00000554290 PEX12O00623 359 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 KLHL41O60662 606 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 SORBS2O94875 1100 aaKnown RBP18.08■□□□□ 0.48
CPSF2-203ENST00000554290 APOA4P06727 396 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 APRTP07741 180 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 VARSP26640 1264 aaKnown RBP18.08■□□□□ 0.48
CPSF2-203ENST00000554290 CCR7P32248 378 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 FOLR3P41439 243 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 GRIA1P42261 906 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 RAB28P51157 221 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 MRGPREQ86SM8 312 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 SLC13A5Q86YT5 568 aaPredicted RBP18.08■□□□□ 0.48
CPSF2-203ENST00000554290 DNAJC22Q8N4W6 341 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 ZNF655Q8N720 491 aaPredicted RBP18.08■□□□□ 0.48
CPSF2-203ENST00000554290 CCDC89Q8N998 374 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 PPHLN1Q8NEY8 458 aaKnown RBP18.08■□□□□ 0.48
CPSF2-203ENST00000554290 C1orf54Q8WWF1 131 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 ZNF778Q96MU6 729 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 GBP5Q96PP8 586 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 TSGA10Q9BZW7 698 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 LRRC4CQ9HCJ2 640 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 PAK5Q9P286 719 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 C5AR2Q9P296 337 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 DHCR7Q9UBM7 475 aaKnown RBP18.08■□□□□ 0.48
CPSF2-203ENST00000554290 PTRH2Q9Y3E5 179 aaKnown RBP18.08■□□□□ 0.48
CPSF2-203ENST00000554290 TCAF1Q9Y4C2 921 aa18.08■□□□□ 0.48
CPSF2-203ENST00000554290 LRRK2Q5S007 2527 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 HCRTR1O43613 425 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 KRT86O43790 486 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 GNLYP22749 145 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 PKLRP30613 574 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 UQCRFS1P47985 274 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 SNX1Q13596 522 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 TMED2Q15363 201 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 INPP5JQ15735 1006 aaPredicted RBP18.07■□□□□ 0.48
CPSF2-203ENST00000554290 KYNUQ16719 465 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 NKAIN1Q4KMZ8 207 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 FHL5Q5TD97 284 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 VWA5B1Q5TIE3 1220 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 TTC23LQ6PF05 361 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 UNC5DQ6UXZ4 953 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 ZNF534Q76KX8 674 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 CLEC1AQ8NC01 280 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 CFAP61Q8NHU2 1237 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 GSDMBQ8TAX9 411 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 DENND1AQ8TEH3 1009 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 DLG3Q92796 817 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 PSMG3-AS1Q96PY0 264 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 SMAD5Q99717 465 aaKnown RBP18.07■□□□□ 0.48
CPSF2-203ENST00000554290 MFRPQ9BY79 579 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 INTS7Q9NVH2 962 aaKnown RBP18.07■□□□□ 0.48
CPSF2-203ENST00000554290 GUCA1BQ9UMX6 200 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 DOPEY2Q9Y3R5 2298 aa18.07■□□□□ 0.48
CPSF2-203ENST00000554290 BLACEA4D250 179 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 GPC4O75487 556 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 MAGP20916 626 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 CD9P21926 228 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 PEBP1P30086 187 aaKnown RBP18.06■□□□□ 0.48
CPSF2-203ENST00000554290 CDC25BP30305 580 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 TTPAP49638 278 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 DCUN1D3Q8IWE4 304 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 SPC24Q8NBT2 197 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 OR2Y1Q8NGV0 311 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 PNPLA2Q96AD5 504 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 PTERQ96BW5 349 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 CATSPERZQ9NTU4 200 aa18.06■□□□□ 0.48
CPSF2-203ENST00000554290 EURLQ9NYK6 297 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms