RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CHRAC1Q9NRG0 131 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 KLC4Q9NSK0 619 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 TREX1Q9NSU2 369 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 POT1Q9NUX5 634 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 SYBUQ9NX95 663 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 ATXN10Q9UBB4 475 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 SLC23A2Q9UGH3 650 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 FKBPLQ9UIM3 349 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 POLEQ07864 2286 aa7.52□□□□□ -1.21
ABCD4-220ENST00000553998 HIVEP1P15822 2718 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 IGHV5-51A0A0C4DH38 117 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 TRBV5-4A0A0C4DH59 114 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 E7ESA3 106 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 GAPDHSO14556 408 aaPredicted RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 VEGFDO43915 354 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CPNE3O75131 537 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 AVILO75366 819 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 RASSF9O75901 435 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 USP1O94782 785 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 SLU7O95391 586 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 PRAMEF1O95521 474 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CAPN1P07384 714 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF8P17098 575 aaPredicted RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 PGAM1P18669 254 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ITGA3P26006 1051 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 MC4RP32245 332 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 PLTPP55058 493 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 PRAMEP78395 509 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 SLC7A5Q01650 507 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CACNG1Q06432 222 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 TUBB3Q13509 450 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CUL1Q13616 776 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZRSR2Q15696 482 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 BBS9Q3SYG4 887 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ANKRD20A4Q4UJ75 823 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ATP13A5Q4VNC0 1218 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CCDC38Q502W7 563 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 AARS2Q5JTZ9 985 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 LDLRAP1Q5SW96 308 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 LYPLAL1Q5VWZ2 237 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 SP5Q6BEB4 398 aaPredicted RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CASC4Q6P4E1 433 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZDHHC24Q6UX98 284 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 FAM151BQ6UXP7 276 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CERS6Q6ZMG9 384 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 LMNTD2Q8IXW0 634 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 IFT20Q8IY31 132 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 MPP5Q8N3R9 675 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 CISD2Q8N5K1 135 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZBTB2Q8N680 514 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 EIF1ADQ8N9N8 165 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 SIDT2Q8NBJ9 832 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 SLC38A9Q8NBW4 561 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ST6GALNAC3Q8NDV1 305 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 DDHD1Q8NEL9 900 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF501Q96CX3 271 aaPredicted RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF514Q96K75 400 aaPredicted RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 TTC1Q99614 292 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 TIMM29Q9BSF4 260 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 NLNQ9BYT8 704 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZCCHC2Q9C0B9 1178 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 TRIM39Q9HCM9 518 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 LATS2Q9NRM7 1088 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 FGF21Q9NSA1 209 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 GPR83Q9NYM4 423 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 LUZP4Q9P127 313 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 DMGDHQ9UI17 866 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 TCFL5Q9UL49 500 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 G3BP2Q9UN86 482 aaKnown RBP7.51□□□□□ -1.21
ABCD4-220ENST00000553998 B3GNT3Q9Y2A9 372 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 MAD1L1Q9Y6D9 718 aa7.51□□□□□ -1.21
ABCD4-220ENST00000553998 ZCWPW2A0A1B0GU75 182 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 ESYT3A0FGR9 886 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 CCDC162PA2VCL2 907 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 CFAP99D6REC4 459 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 MEN1O00255 615 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 KMOO15229 486 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 SLC25A14O95258 325 aaPredicted RBP7.5□□□□□ -1.21
ABCD4-220ENST00000553998 GOT2P00505 430 aaKnown RBP7.5□□□□□ -1.21
ABCD4-220ENST00000553998 POLBP06746 335 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 ZNF7P17097 686 aaPredicted RBP7.5□□□□□ -1.21
ABCD4-220ENST00000553998 NMBRP28336 390 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 FOXN2P32314 431 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 RORAP35398 523 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 PPARGP37231 505 aaPredicted RBP7.5□□□□□ -1.21
ABCD4-220ENST00000553998 RRADP55042 308 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 SOX8P57073 446 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 CRADDP78560 199 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 TMPRSS15P98073 1019 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 DHX9Q08211 1270 aaKnown RBP7.5□□□□□ -1.21
ABCD4-220ENST00000553998 PDIA2Q13087 525 aaKnown RBP7.5□□□□□ -1.21
ABCD4-220ENST00000553998 GPS2Q13227 327 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 GPR18Q14330 331 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 FRG1Q14331 258 aaKnown RBP7.5□□□□□ -1.21
ABCD4-220ENST00000553998 ITIH4Q14624 930 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 PTPRCAPQ14761 206 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 MSS51Q4VC12 460 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 SPANXN3Q5MJ09 141 aa7.5□□□□□ -1.21
ABCD4-220ENST00000553998 PLEKHS1Q5SXH7 462 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms