RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 COMMD10Q9Y6G5 202 aa8.12□□□□□ -1.11
PSEN1-209ENST00000553855 PRSS21Q9Y6M0 314 aa8.12□□□□□ -1.11
PSEN1-209ENST00000553855 GSAPA4D1B5 854 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 OR6C74A6NCV1 312 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 EFCAB7A8K855 629 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 J3QW42 95 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 SGTAO43765 313 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 PKMP14618 531 aaKnown RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CD82P27701 267 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 SHMT2P34897 504 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 MAGEA3P43357 314 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 ABCG1P45844 678 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 PDX1P52945 283 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 ADARP55265 1226 aaKnown RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 FOXM1Q08050 763 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 ILF2Q12905 390 aaKnown RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 PDIA2Q13087 525 aaKnown RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 SEMA3AQ14563 771 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 KCTD19Q17RG1 926 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 TYSND1Q2T9J0 566 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 PLEKHS1Q5SXH7 462 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 TMTC4Q5T4D3 741 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 DCAF12Q5T6F0 453 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 HIBCHQ6NVY1 386 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 DUS1LQ6P1R4 473 aaKnown RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CEACAM20Q6UY09 585 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CEP128Q6ZU80 1094 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 KCNMB4Q86W47 210 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CILP2Q8IUL8 1156 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 PALM2Q8IXS6 379 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 LILRA3Q8N6C8 439 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CFAP61Q8NHU2 1237 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 KCNE4Q8WWG9 221 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CDKL2Q92772 493 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CFAP36Q96G28 342 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 SIGLEC10Q96LC7 697 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 C9orf72Q96LT7 481 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 TEFMQ96QE5 360 aaKnown RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 TAAR9Q96RI9 348 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 ZPBPQ9BS86 351 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 HGH1Q9BTY7 390 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 RAB33BQ9H082 229 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 OR52A5Q9H2C5 316 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 DPH5Q9H2P9 285 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 IARS2Q9NSE4 1012 aaKnown RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 WHRNQ9P202 907 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 MARCH4Q9P2E8 410 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 EPHA6Q9UF33 1036 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 FBXO5Q9UKT4 447 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 SLC39A10Q9ULF5 831 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CHMP2BQ9UQN3 213 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 CRYL1Q9Y2S2 319 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 RAXQ9Y2V3 346 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 PCDHGA7Q9Y5G6 932 aa8.11□□□□□ -1.11
PSEN1-209ENST00000553855 ARID1BQ8NFD5 2236 aaPredicted RBP8.11□□□□□ -1.11
PSEN1-209ENST00000553855 GOLGA4Q13439 2230 aaKnown RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 MN1Q10571 1320 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 SCN8AQ9UQD0 1980 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ZCWPW2A0A1B0GU75 182 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 SLC5A10A0PJK1 596 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CTAGE15A4D2H0 777 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 OR5K3A6NET4 321 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 IQCF5A8MTL0 148 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 C2orf74A8MZ97 194 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 B4E171 279 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 POLR1CO15160 346 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 NVLO15381 856 aaKnown RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 RAD51CO43502 376 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 VPS26AO75436 327 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 GHRHP01286 108 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ANKRD34CP0C6C1 535 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CTAGE8P0CG41 777 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 HGFP14210 728 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 POLR2CP19387 275 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CDH3P22223 829 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 AOAHP28039 575 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 PDHA2P29803 388 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CCR7P32248 378 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CSF2RBP32927 897 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CCNFP41002 786 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 TSPAN7P41732 249 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ELK3P41970 407 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ARCN1P48444 511 aaKnown RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 RGS4P49798 205 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 SEPHS1P49903 392 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 UCNP55089 124 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 GFERP55789 205 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ACY1Q03154 408 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ABRQ12979 859 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 PRKG2Q13237 762 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CRYMQ14894 314 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 C16orf72Q14CZ0 275 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 HSP90AA5PQ58FG0 334 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 LRRC8EQ6NSJ5 796 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 UNC5DQ6UXZ4 953 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ZNF574Q6ZN55 896 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 FAM92BQ6ZTR7 304 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 KIAA0408Q6ZU52 694 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ARHGAP22Q7Z5H3 698 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CTAGE6Q86UF2 777 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms