RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 MRGPRX2Q96LB1 330 aa12.39□□□□□ -0.43
VPS29-211ENST00000553128 OLFM3Q96PB7 478 aa12.39□□□□□ -0.43
VPS29-211ENST00000553128 TMEM121Q9BTD3 319 aa12.39□□□□□ -0.43
VPS29-211ENST00000553128 CHRNA10Q9GZZ6 450 aa12.39□□□□□ -0.43
VPS29-211ENST00000553128 SLC26A1Q9H2B4 701 aa12.39□□□□□ -0.43
VPS29-211ENST00000553128 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.39□□□□□ -0.43
VPS29-211ENST00000553128 PKP3Q9Y446 797 aa12.39□□□□□ -0.43
VPS29-211ENST00000553128 ARL5AQ9Y689 179 aa12.39□□□□□ -0.43
VPS29-211ENST00000553128 A0A0J9YY10 115 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 A0A1B0GX78 115 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 DYTNA2CJ06 578 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 ZNHIT1O43257 154 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 ONECUT2O95948 504 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 ALBP02768 609 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 CHRM5P08912 532 aaPredicted RBP12.38□□□□□ -0.43
VPS29-211ENST00000553128 CD99P14209 185 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 AGAP20933 346 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 KDELR1P24390 212 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 SLC1A5Q15758 541 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 INAQ16352 499 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 SLC5A12Q1EHB4 618 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 FAAH2Q6GMR7 532 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 MAP7D3Q8IWC1 876 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 ANKRD20A12PQ8NF67 263 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 TFGQ92734 400 aaPredicted RBP12.38□□□□□ -0.43
VPS29-211ENST00000553128 HAS2Q92819 552 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 OXNAD1Q96HP4 312 aaPredicted RBP12.38□□□□□ -0.43
VPS29-211ENST00000553128 TEKT5Q96M29 485 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 SPOCK3Q9BQ16 436 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 ENKD1Q9H0I2 346 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 FAM96AQ9H5X1 160 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 ASB8Q9H765 288 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 MVB12BQ9H7P6 319 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 MRM3Q9HC36 420 aaKnown RBP12.38□□□□□ -0.43
VPS29-211ENST00000553128 EURLQ9NYK6 297 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 FAM153AQ9UHL3 310 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 FKBPLQ9UIM3 349 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 PLAGL1Q9UM63 463 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 PLCL2Q9UPR0 1127 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 CACNA1CQ13936 2221 aa12.38□□□□□ -0.43
VPS29-211ENST00000553128 C17orf113A0A1B0GUU1 675 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 KLHL33A6NCF5 533 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 C3orf70A6NLC5 250 aaPredicted RBP12.37□□□□□ -0.43
VPS29-211ENST00000553128 VSTM2BA6NLU5 285 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 IFRD1O00458 451 aaPredicted RBP12.37□□□□□ -0.43
VPS29-211ENST00000553128 STX7O15400 261 aaKnown RBP12.37□□□□□ -0.43
VPS29-211ENST00000553128 SRP72O76094 671 aaKnown RBP12.37□□□□□ -0.43
VPS29-211ENST00000553128 RASAL1O95294 804 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 MED26O95402 600 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 WDPCPO95876 746 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 HPP00738 406 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 PRR35P0CG20 571 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 PYGMP11217 842 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 ESRRAP11474 423 aaPredicted RBP12.37□□□□□ -0.43
VPS29-211ENST00000553128 NFKB1P19838 968 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 SMSP52788 366 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 XIAPP98170 497 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.37□□□□□ -0.43
VPS29-211ENST00000553128 SLC9A4Q6AI14 798 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 MEX3BQ6ZN04 569 aaKnown RBP12.37□□□□□ -0.43
VPS29-211ENST00000553128 PRSS58Q8IYP2 241 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 LMNTD1Q8N9Z9 388 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 OR4K2Q8NGD2 314 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 NRGNQ92686 78 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.37□□□□□ -0.43
VPS29-211ENST00000553128 MAU2Q9Y6X3 613 aa12.37□□□□□ -0.43
VPS29-211ENST00000553128 DSCR3O14972 297 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 SNRNP200O75643 2136 aaKnown RBP12.36□□□□□ -0.43
VPS29-211ENST00000553128 PROSCO94903 275 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 ACPPP15309 386 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 MAGP20916 626 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 CD151P48509 253 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 CDKN1CP49918 316 aaPredicted RBP12.36□□□□□ -0.43
VPS29-211ENST00000553128 KLC1Q07866 573 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 WASHC5Q12768 1159 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 PDK1Q15118 436 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 MCATQ8IVS2 390 aaKnown RBP12.36□□□□□ -0.43
VPS29-211ENST00000553128 KBTBD2Q8IY47 623 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 IPMKQ8NFU5 416 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 CCDC110Q8TBZ0 833 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 DLG3Q92796 817 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 TREX2Q9BQ50 279 aaPredicted RBP12.36□□□□□ -0.43
VPS29-211ENST00000553128 CRB3Q9BUF7 120 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 GSX1Q9H4S2 264 aaPredicted RBP12.36□□□□□ -0.43
VPS29-211ENST00000553128 CUTCQ9NTM9 273 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 HACD3Q9P035 362 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 SAE1Q9UBE0 346 aaPredicted RBP12.36□□□□□ -0.43
VPS29-211ENST00000553128 MEMO1Q9Y316 297 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 PCDHGB6Q9Y5F9 930 aa12.36□□□□□ -0.43
VPS29-211ENST00000553128 AGAP14A8MT82 685 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 ISM1B1AKI9 464 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 CCL22O00626 93 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 APOL1O14791 398 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 USP1O94782 785 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 EPOP01588 193 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 CRYABP02511 175 aaKnown RBP12.35□□□□□ -0.43
VPS29-211ENST00000553128 PRSS56P0CW18 603 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 COX6A1P12074 109 aa12.35□□□□□ -0.43
VPS29-211ENST00000553128 ATP1B2P14415 290 aaPredicted RBP12.35□□□□□ -0.43
VPS29-211ENST00000553128 GRIA3P42263 894 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms