RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 PRKG2Q13237 762 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 ATP1A4Q13733 1029 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 ESPL1Q14674 2120 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 PTPRCAPQ14761 206 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 ASTE1Q2TB18 679 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-217ENST00000552801 EIF2S3LQ2VIR3 472 aaKnown RBP8.43□□□□□ -1.06
TMEM116-217ENST00000552801 GPR33Q49SQ1 333 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 PLEKHS1Q5SXH7 462 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 VWA5B1Q5TIE3 1220 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 ARHGEF18Q6ZSZ5 1173 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 LURAP1LQ8IV03 231 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 KATNAL2Q8IYT4 538 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 NXPE1Q8N323 547 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 ZADH2Q8N4Q0 377 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 NOA1Q8NC60 698 aaKnown RBP8.43□□□□□ -1.06
TMEM116-217ENST00000552801 DENND1AQ8TEH3 1009 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 VPS50Q96JG6 964 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 LINC00615Q96LM1 132 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-217ENST00000552801 C5orf34Q96MH7 638 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 TBL1YQ9BQ87 522 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 KLHL25Q9H0H3 589 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 FAM96AQ9H5X1 160 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 COG4Q9H9E3 785 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 C5AR2Q9P296 337 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 IFT80Q9P2H3 777 aaPredicted RBP8.43□□□□□ -1.06
TMEM116-217ENST00000552801 ASF1AQ9Y294 204 aa8.43□□□□□ -1.06
TMEM116-217ENST00000552801 TDRKHQ9Y2W6 561 aaKnown RBP8.43□□□□□ -1.06
TMEM116-217ENST00000552801 PTRH2Q9Y3E5 179 aaKnown RBP8.43□□□□□ -1.06
TMEM116-217ENST00000552801 hCG_1818297A0A087WSY0 165 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 CCDC78A2IDD5 438 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 ENO4A6NNW6 628 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 APOC4-APOC2K7ER74 178 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 PJA2O43164 708 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 TJP3O95049 919 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 APOC2P02655 101 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 FTH1P02794 183 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 GSTM1P09488 218 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 PIM1P11309 404 aaPredicted RBP8.42□□□□□ -1.06
TMEM116-217ENST00000552801 ST6GAL1P15907 406 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 PSMB4P28070 264 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 SHMT2P34897 504 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 CD151P48509 253 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 EIF3EP60228 445 aaKnown RBP8.42□□□□□ -1.06
TMEM116-217ENST00000552801 DCDP81605 110 aaKnown RBP8.42□□□□□ -1.06
TMEM116-217ENST00000552801 GSTM4Q03013 218 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 ABRQ12979 859 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 RPA4Q13156 261 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 SSPNQ14714 243 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 PRAMEF17Q5VTA0 474 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 C1orf189Q5VU69 101 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 OR52E1Q8NGJ3 308 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 OR1L3Q8NH93 324 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 GSDMBQ8TAX9 411 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 NAT14Q8WUY8 206 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 TFGQ92734 400 aaPredicted RBP8.42□□□□□ -1.06
TMEM116-217ENST00000552801 TCTN2Q96GX1 697 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 PPM1MQ96MI6 270 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 NDC1Q9BTX1 674 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 NUDT9Q9BW91 350 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 TSSK1BQ9BXA7 367 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 AP1M1Q9BXS5 423 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 ACBD3Q9H3P7 528 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 TFB2MQ9H5Q4 396 aaKnown RBP8.42□□□□□ -1.06
TMEM116-217ENST00000552801 AGPAT4Q9NRZ5 378 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 PCMTD2Q9NV79 361 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 ZDHHC3Q9NYG2 299 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 ACTR10Q9NZ32 417 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 SMARCAL1Q9NZC9 954 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 POLG2Q9UHN1 485 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 SRPK3Q9UPE1 567 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 SAR1BQ9Y6B6 198 aa8.42□□□□□ -1.06
TMEM116-217ENST00000552801 ISM1B1AKI9 464 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 TCP11X1B4DZS4 312 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 BTN3A1O00481 513 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 SORBS2O94875 1100 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 RPN2P04844 631 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 RBP3P10745 1247 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 PVRP15151 417 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 ALAS2P22557 587 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 TNFRSF8P28908 595 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 PPARGP37231 505 aaPredicted RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 GLRBP48167 497 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 PER3P56645 1201 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 OTUD4Q01804 1114 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 MRPL49Q13405 166 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 CASP8Q14790 479 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 ANKRD20A2Q5SQ80 823 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 ANKRD20A1Q5TYW2 823 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 ANKRD20A3Q5VUR7 823 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 MRPL14Q6P1L8 145 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 TLDC1Q6P9B6 456 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 SPESP1Q6UW49 350 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 BBS12Q6ZW61 710 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 TRIM46Q7Z4K8 759 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 ZBTB2Q8N680 514 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 C19orf47Q8N9M1 422 aaKnown RBP8.41□□□□□ -1.06
TMEM116-217ENST00000552801 GLIS1Q8NBF1 620 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 SLC38A9Q8NBW4 561 aa8.41□□□□□ -1.06
TMEM116-217ENST00000552801 PHC3Q8NDX5 983 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms