RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 RAB3IL1Q8TBN0 382 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 C2CD4CQ8TF44 421 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 DDI1Q8WTU0 396 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 SLC25A43Q8WUT9 341 aaPredicted RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 UBLCP1Q8WVY7 318 aaPredicted RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 ANKRD7Q92527 254 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 RAD54LQ92698 747 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 RIT1Q92963 219 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 SLC25A28Q96A46 364 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 ESAMQ96AP7 390 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 HMCESQ96FZ2 354 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 SLC41A3Q96GZ6 507 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 ANKRD27Q96NW4 1050 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 FCRL4Q96PJ5 515 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 GPR87Q9BY21 358 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 TMEM245Q9H330 911 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 KCNK15Q9H427 330 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 MVB12BQ9H7P6 319 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 SPACA1Q9HBV2 294 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 WDR6Q9NNW5 1121 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 KLHL1Q9NR64 748 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 CNOT2Q9NZN8 540 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 CHMP5Q9NZZ3 219 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 CTNNAL1Q9UBT7 734 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 MTRF1LQ9UGC7 380 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 MGAT4BQ9UQ53 548 aa4.09□□□□□ -1.76
USP44-208ENST00000552440 HBS1LQ9Y450 684 aaKnown RBP4.09□□□□□ -1.76
USP44-208ENST00000552440 BAZ1BQ9UIG0 1483 aaKnown RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 PARD3Q8TEW0 1356 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 MACROD2A1Z1Q3 448 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 AHRRA9YTQ3 701 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 NPIPB11E5RHQ5 1161 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 E7ENX8 843 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 H3BQ06 376 aaPredicted RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 ANKRD28O15084 1053 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 RRP8O43159 456 aaKnown RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 SEC14L5O43304 696 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 KRT86O43790 486 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 NIPSNAP2O75323 286 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 RSL1D1O76021 490 aaKnown RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 PGLSO95336 258 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 LGI1O95970 557 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 UGT2B4P06133 528 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 ASNSP08243 561 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 VPREB1P12018 145 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 IGFBP2P18065 325 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 ITGALP20701 1170 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 ADORA2AP29274 412 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 ENTPD1P49961 510 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 BLVRAP53004 296 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 EEFSECP57772 596 aaKnown RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 SIRPAP78324 504 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 TOB2Q14106 344 aaPredicted RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 IL18Q14116 193 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 E2F2Q14209 437 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 PDK3Q15120 406 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 ELAVL1Q15717 326 aaKnown RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 HIST2H2ACQ16777 129 aaPredicted RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 SYT16Q17RD7 645 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 GPAT3Q53EU6 434 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 Q5PR19 223 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 PHYHD1Q5SRE7 291 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 LY6G5CQ5SRR4 150 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 TBC1D9BQ66K14 1250 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 CAPRIN2Q6IMN6 1127 aaKnown RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 IL20RBQ6UXL0 311 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 PRSS45Q7RTY3 260 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 RNF144BQ7Z419 303 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 TDRPQ86YL5 185 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 FOXP4Q8IVH2 680 aaPredicted RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 AQP12AQ8IXF9 295 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 SYCE1Q8N0S2 351 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 FBXO39Q8N4B4 442 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 C8orf58Q8NAV2 365 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 FAM71CQ8NEG0 241 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 CMASQ8NFW8 434 aaPredicted RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 LIPHQ8WWY8 451 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 OIT3Q8WWZ8 545 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 RLN3Q8WXF3 142 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 ST8SIA2Q92186 375 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 MTMR9Q96QG7 549 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 FAM213AQ9BRX8 229 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 NTMT1Q9BV86 223 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 LZTFL1Q9NQ48 299 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 SLC2A4RGQ9NR83 387 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 MTMR10Q9NXD2 777 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 LARSQ9P2J5 1176 aaKnown RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 NKX1-2Q9UD57 310 aaPredicted RBP4.08□□□□□ -1.76
USP44-208ENST00000552440 DNAJB4Q9UDY4 337 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 SLC25A13Q9UJS0 675 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 MAU2Q9Y6X3 613 aa4.08□□□□□ -1.76
USP44-208ENST00000552440 UTYO14607 1347 aa4.07□□□□□ -1.76
USP44-208ENST00000552440 XDHP47989 1333 aa4.07□□□□□ -1.76
USP44-208ENST00000552440 OR52A4PA6NMU1 304 aa4.07□□□□□ -1.76
USP44-208ENST00000552440 KLRF2D3W0D1 207 aa4.07□□□□□ -1.76
USP44-208ENST00000552440 ALOX15BO15296 676 aa4.07□□□□□ -1.76
USP44-208ENST00000552440 DCXO43602 365 aa4.07□□□□□ -1.76
USP44-208ENST00000552440 FCGR3BO75015 233 aa4.07□□□□□ -1.76
USP44-208ENST00000552440 CSDE1O75534 798 aaKnown RBP4.07□□□□□ -1.76
USP44-208ENST00000552440 KDM4BO94953 1096 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms