RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 LILRA3Q8N6C8 439 aaPredicted RBP14.67□□□□□ -0.06
CACNB3-220ENST00000551716 BLOC1S5Q8TDH9 187 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 MAGED4Q96JG8 741 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 RNF157Q96PX1 679 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 RNF32Q9H0A6 362 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 ASB8Q9H765 288 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 ZNF160Q9HCG1 818 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 PTGFRNQ9P2B2 879 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 POLG2Q9UHN1 485 aa14.67□□□□□ -0.06
CACNB3-220ENST00000551716 VSTM2BA6NLU5 285 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 GAPDHSO14556 408 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 MAP2K7O14733 419 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 DSCR3O14972 297 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 KDM1AO60341 852 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 WFS1O76024 890 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 BMP10O95393 424 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 SERPINA7P05543 415 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 CHRM5P08912 532 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 GSTM1P09488 218 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 SOX11P35716 441 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 GCGRP47871 477 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 WNT3AP56704 352 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 CSNK1G2P78368 415 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 FANCCQ00597 558 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 GSTM4Q03013 218 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 C3AR1Q16581 482 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 TRIM73Q86UV7 250 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 MCATQ8IVS2 390 aaKnown RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 EID3Q8N140 333 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 THAP3Q8WTV1 239 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 ULK4Q96C45 1275 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 TEKT5Q96M29 485 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 TREX2Q9BQ50 279 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 CRB3Q9BUF7 120 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 MAK16Q9BXY0 300 aaKnown RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 NUP62CLQ9H1M0 184 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 SOX17Q9H6I2 414 aaPredicted RBP14.66□□□□□ -0.06
CACNB3-220ENST00000551716 COG4Q9H9E3 785 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 UBP1Q9NZI7 540 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 MEMO1Q9Y316 297 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 CCDC88CQ9P219 2028 aa14.66□□□□□ -0.06
CACNB3-220ENST00000551716 NSG1A0A0A6YYJ2 146 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 C2orf81A6NN90 581 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 FOXO6A8MYZ6 492 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 ZNF487B1APH4 448 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 SGTAO43765 313 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 PRAMEF2O60811 474 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 SRP72O76094 671 aaKnown RBP14.65□□□□□ -0.06
CACNB3-220ENST00000551716 CYP1A2P05177 515 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 CTSBP07858 339 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 UQCRHP07919 91 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 PRR35P0CG20 571 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 ATP1B2P14415 290 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-220ENST00000551716 ZFXP17010 805 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-220ENST00000551716 KDELR1P24390 212 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 GJC1P36383 396 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 NSG1P42857 185 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 RAB28P51157 221 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 TMPRSS15P98073 1019 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 OCA2Q04671 838 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 GRM7Q14831 915 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 KIR2DS3Q14952 304 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 FAM214AQ32MH5 1076 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 TCTE1Q5JU00 501 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 Q6ZPB1 254 aaPredicted RBP14.65□□□□□ -0.06
CACNB3-220ENST00000551716 RIPOR1Q6ZS17 1223 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 SPPL2CQ8IUH8 684 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 SLC25A41Q8N5S1 370 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 PSMF1Q92530 271 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 HGH1Q9BTY7 390 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 THAP2Q9H0W7 228 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 CUTCQ9NTM9 273 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 LCMT1Q9UIC8 334 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 ICKQ9UPZ9 632 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 ZNF835Q9Y2P0 537 aa14.65□□□□□ -0.06
CACNB3-220ENST00000551716 BUD23O43709 281 aaKnown RBP14.64□□□□□ -0.07
CACNB3-220ENST00000551716 ZRANB2O95218 330 aaKnown RBP eCLIP14.64□□□□□ -0.07
CACNB3-220ENST00000551716 ICAM2P13598 275 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 CACNG1Q06432 222 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 SLC1A5Q15758 541 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 ZC3H12BQ5HYM0 836 aaKnown RBP14.64□□□□□ -0.07
CACNB3-220ENST00000551716 ATG9BQ674R7 924 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 SHISA6Q6ZSJ9 500 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 COX15Q7KZN9 410 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 BZW1Q7L1Q6 419 aaKnown RBP14.64□□□□□ -0.07
CACNB3-220ENST00000551716 NLRP9Q7RTR0 991 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 PLD5Q8N7P1 536 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 BRIX1Q8TDN6 353 aaKnown RBP14.64□□□□□ -0.07
CACNB3-220ENST00000551716 CA5BP1Q8WTZ4 195 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 PHF10Q8WUB8 498 aaKnown RBP14.64□□□□□ -0.07
CACNB3-220ENST00000551716 COPS8Q99627 209 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 NRTNQ99748 197 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 ENAMQ9NRM1 1142 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 TEKT2Q9UIF3 430 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 CRLS1Q9UJA2 301 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 TINAGQ9UJW2 476 aa14.64□□□□□ -0.07
CACNB3-220ENST00000551716 BZW2Q9Y6E2 419 aaKnown RBP14.64□□□□□ -0.07
CACNB3-220ENST00000551716 DNHD1Q96M86 4753 aa14.63□□□□□ -0.07
CACNB3-220ENST00000551716 AGAP14A8MT82 685 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms