RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 DHPSP49366 369 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CASP4P49662 377 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF132P52740 706 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 MVDP53602 400 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 MYL6P60660 151 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 RBP5P82980 135 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GAD2Q05329 585 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CYP24A1Q07973 514 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF234Q14588 700 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 KPNB1Q14974 876 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ZXDCQ2QGD7 858 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 FAM133BQ5BKY9 247 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 RILPL1Q5EBL4 403 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TPRG1LQ5T0D9 272 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 C9orf64Q5T6V5 341 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 KRT79Q5XKE5 535 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ADALQ6DHV7 355 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 NADSYN1Q6IA69 706 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 AADACL2Q6P093 401 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ARMCX5Q6P1M9 558 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 FAM173BQ6P4H8 233 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF627Q7L945 461 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 BNIPLQ7Z465 357 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GALNT7Q86SF2 657 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 GPBP1Q86WP2 473 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TMPRSS12Q86WS5 348 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC83Q8IWF9 413 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SCN4BQ8IWT1 228 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF683Q8IZ20 524 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ADGRF3Q8IZF5 1079 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SCML4Q8N228 414 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ELMOD1Q8N336 334 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CPXM2Q8N436 756 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 AADATQ8N5Z0 425 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CSGALNACT2Q8N6G5 542 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 C12orf29Q8N999 325 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 FAM47BQ8NA70 645 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 OR52K2Q8NGK3 314 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 RFWD2Q8NHY2 731 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ERMNQ8TAM6 284 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 LMO3Q8TAP4 145 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 MRPS31Q92665 395 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CENPIQ92674 756 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SEMA4DQ92854 862 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 IGSF8Q969P0 613 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 BIRC7Q96CA5 298 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 RNFT2Q96EX2 444 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 HPDLQ96IR7 371 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 C8orf76Q96K31 380 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ADAD1Q96M93 576 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 AK8Q96MA6 479 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 C5orf34Q96MH7 638 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 HNRNPABQ99729 332 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 FAM213AQ9BRX8 229 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TCHPQ9BT92 498 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 MSTO1Q9BUK6 570 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 NPLQ9BXD5 320 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CADM1Q9BY67 442 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 UBXN6Q9BZV1 441 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SPRY4Q9C004 299 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ELOVL4Q9GZR5 314 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CTDSP1Q9GZU7 261 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 FAM124BQ9H5Z6 455 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SMYD3Q9H7B4 428 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TM9SF3Q9HD45 589 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 PRSS16Q9NQE7 514 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 AGPAT3Q9NRZ7 376 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SLC22A11Q9NSA0 550 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 KRT84Q9NSB2 600 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 BEX4Q9NWD9 120 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ASB6Q9NWX5 421 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 COMMD8Q9NX08 183 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 ARL15Q9NXU5 204 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TAS2R10Q9NYW0 307 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 HCN3Q9P1Z3 774 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 TBC1D14Q9P2M4 693 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 UXTQ9UBK9 157 aaPredicted RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SEL1LQ9UBV2 794 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 IPO11Q9UI26 975 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 AGO1Q9UL18 857 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 DHDHQ9UQ10 334 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SCML2Q9UQR0 700 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 OSGIN2Q9Y236 505 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 KIF3AQ9Y496 699 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SRPRBQ9Y5M8 271 aaKnown RBP2.39□□□□□ -2.03
CPSF6-207ENST00000551516 SNX9Q9Y5X1 595 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 HS3ST3A1Q9Y663 406 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 CLIC4Q9Y696 253 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 STON1Q9Y6Q2 735 aa2.39□□□□□ -2.03
CPSF6-207ENST00000551516 DCHS2Q6V1P9 2916 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 MYOFQ9NZM1 2061 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 PRRC2CQ9Y520 2896 aaKnown RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FAM237AA0A1B0GTK4 181 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 TCRBV5S1A1TA0A578 114 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM247A6NEH6 219 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FAM90A7PA6NKC0 464 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 LRRIQ3A6PVS8 624 aaPredicted RBP2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FAM90A22PA8MWA6 464 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FAM90A12PA8MX19 464 aa2.38□□□□□ -2.03
CPSF6-207ENST00000551516 FAM90A23PA8MXZ1 464 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms