RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 LSM1O15116 133 aaKnown RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 SLC31A1O15431 190 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 LATO43561 262 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 VPS4BO75351 444 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 CLDN9O95484 217 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 IGFALSP35858 605 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 NEK2P51955 445 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 CCINQ13939 588 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 RFTN2Q52LD8 501 aaPredicted RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 KIAA1324Q6UXG2 1013 aaKnown RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 RNF175Q8N4F7 328 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 FNDC5Q8NAU1 212 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 PHC3Q8NDX5 983 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 FAM3CQ92520 227 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 ZNF514Q96K75 400 aaPredicted RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 DNAJC11Q9NVH1 559 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 TRPS1Q9UHF7 1281 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 ZNF490Q9ULM2 529 aaPredicted RBP19.17■□□□□ 0.66
SSH1-209ENST00000551165 L3MBTL1Q9Y468 752 aa19.17■□□□□ 0.66
SSH1-209ENST00000551165 KCNE1BA0A087WTH5 132 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 C17orf113A0A1B0GUU1 675 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 MANBAO00462 879 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 SCAMP1O15126 338 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 CFLARO15519 480 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 SNRPB2P08579 225 aaKnown RBP19.16■□□□□ 0.66
SSH1-209ENST00000551165 EZRP15311 586 aaKnown RBP19.16■□□□□ 0.66
SSH1-209ENST00000551165 ACADLP28330 430 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 STX1BP61266 288 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 MRPS21P82921 87 aaKnown RBP19.16■□□□□ 0.66
SSH1-209ENST00000551165 E2F5Q15329 346 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 NR6A1Q15406 480 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 PGM2L1Q6PCE3 622 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 Q6ZS52 159 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 Q7L0L9 218 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 MIER2Q8N344 545 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 HM13Q8TCT9 377 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 CCDC124Q96CT7 223 aaKnown RBP19.16■□□□□ 0.66
SSH1-209ENST00000551165 ZDHHC5Q9C0B5 715 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 OR52A5Q9H2C5 316 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 EFCAB1Q9HAE3 211 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 AIG1Q9NVV5 245 aa19.16■□□□□ 0.66
SSH1-209ENST00000551165 CFAP20Q9Y6A4 193 aaKnown RBP19.16■□□□□ 0.66
SSH1-209ENST00000551165 CD22P20273 847 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 ACSL1P33121 698 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 UFM1P61960 85 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 ATP6AP1LQ52LC2 224 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 WASHC2DQ5SRD0 308 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 REP15Q6BDI9 236 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 LAYNQ6UX15 382 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 RETREG3Q86VR2 466 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 AMZ2Q86W34 360 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 THOC6Q86W42 341 aaKnown RBP19.15■□□□□ 0.66
SSH1-209ENST00000551165 ARHGAP24Q8N264 748 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 CCDC138Q96M89 665 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 FOPNLQ96NB1 174 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 MRPL40Q9NQ50 206 aaKnown RBP19.15■□□□□ 0.66
SSH1-209ENST00000551165 RIC8BQ9NVN3 520 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 CA5BQ9Y2D0 317 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 H0Y3Z8 333 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 NR5A2O00482 541 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 ULK1O75385 1050 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 CAPN3P20807 821 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 MSX2P35548 267 aaPredicted RBP19.15■□□□□ 0.66
SSH1-209ENST00000551165 ZFP36L2P47974 494 aaKnown RBP19.15■□□□□ 0.66
SSH1-209ENST00000551165 ERVK-8P63133 956 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 AP5B1Q2VPB7 878 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 VPS26BQ4G0F5 336 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 RIPOR1Q6ZS17 1223 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 LRRTM4Q86VH4 590 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 HORMAD1Q86X24 394 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 RNF148Q8N7C7 305 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 ZNF480Q8WV37 535 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 PLEKHM1Q9Y4G2 1056 aa19.15■□□□□ 0.66
SSH1-209ENST00000551165 E7EQ34 232 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 PDYNP01213 254 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 IDO1P14902 403 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 RPL10P27635 214 aaKnown RBP19.14■□□□□ 0.66
SSH1-209ENST00000551165 ACADVLP49748 655 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 ART3Q13508 389 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 LRP8Q14114 963 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 RPS6KA2Q15349 733 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 HABP4Q5JVS0 413 aaKnown RBP19.14■□□□□ 0.66
SSH1-209ENST00000551165 SPATA19Q7Z5L4 167 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 RGL4Q8IZJ4 473 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 PLCD3Q8N3E9 789 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 USP7Q93009 1102 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 CDRT15Q96T59 188 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 WDR41Q9HAD4 459 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 PLAGL1Q9UM63 463 aa19.14■□□□□ 0.66
SSH1-209ENST00000551165 TCRBV21S2A2A0A5A6 115 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 IL12AP29459 219 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 HALP42357 657 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 CLDN2P57739 230 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 CHIT1Q13231 466 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 KIAA1161Q6NSJ0 714 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 CHST15Q7LFX5 561 aaPredicted RBP19.14■□□□□ 0.65
SSH1-209ENST00000551165 OR5AR1Q8NGP9 310 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 MRPL1Q9BYD6 325 aaKnown RBP19.14■□□□□ 0.65
SSH1-209ENST00000551165 SLC52A3Q9NQ40 469 aa19.14■□□□□ 0.65
SSH1-209ENST00000551165 C2orf42Q9NWW7 574 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms