RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ZNF140P52738 457 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 PLTPP55058 493 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 SLC25A3Q00325 362 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ACVR1Q04771 509 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 DUSP2Q05923 314 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 DPTQ07507 201 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 RALGDSQ12967 914 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 SGCGQ13326 291 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 MRPL49Q13405 166 aaKnown RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ARHGEF7Q14155 803 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 FRG1Q14331 258 aaKnown RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ANGPT1Q15389 498 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 CNGA3Q16281 694 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 SMN1Q16637 294 aaKnown RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 UGT8Q16880 541 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF284Q2VY69 593 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 POM121L1PQ3SYA9 428 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 CCDC38Q502W7 563 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TEX35Q5T0J7 233 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 LRRC66Q68CR7 880 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 PDPK2PQ6A1A2 396 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 CRTC1Q6UUV9 634 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ZDHHC24Q6UX98 284 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 GLT6D1Q7Z4J2 308 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 HORMAD1Q86X24 394 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 CACUL1Q86Y37 369 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 CMIPQ8IY22 773 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TTC30BQ8N4P2 665 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 AFAP1L2Q8N4X5 818 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 SLC25A41Q8N5S1 370 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ZBTB44Q8NCP5 570 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 DENND6BQ8NEG7 585 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 FBXO25Q8TCJ0 367 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 BLOC1S5Q8TDH9 187 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 CXorf40AQ8TE69 158 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ZC3H10Q96K80 434 aaKnown RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 COQ10AQ96MF6 247 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 LENG8Q96PV6 779 aaPredicted RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 FMO2Q99518 471 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 EBNA1BP2Q99848 306 aaKnown RBP5.69□□□□□ -1.5
SCAF11-213ENST00000550629 APOL2Q9BQE5 337 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 RHOXF2Q9BQY4 288 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 KIFC1Q9BW19 673 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 GPR63Q9BZJ6 419 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 EPC1Q9H2F5 836 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 DPH5Q9H2P9 285 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 ANKZF1Q9H8Y5 726 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 APPL1Q9UKG1 709 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 EDARQ9UNE0 448 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 DMTF1Q9Y222 760 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 PKP3Q9Y446 797 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 SHROOM3Q8TF72 1996 aa5.69□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3DA0A087WVF3 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3IA0A087WXS9 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3EA0A087X179 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3KA0A087X1G2 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3FA6NER0 549 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 IGLON5A6NGN9 336 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3LB9A6J9 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 GOLGA8MH3BSY2 632 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 H7C0S8 307 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 PLK4O00444 970 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 STX7O15400 261 aaKnown RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 PRAMEF4O60810 478 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TMEM127O75204 238 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 AVILO75366 819 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 SPAG6O75602 509 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TM7SF2O76062 418 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 USP1O94782 785 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 IGHV4-34P06331 123 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3HP0C7X1 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TPH1P17752 444 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 PGAM1P18669 254 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 HK1P19367 917 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 MGAT1P26572 445 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ECHS1P30084 290 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ACSL1P33121 698 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 HOXD12P35452 270 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 PXNP49023 591 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 SPINT3P49223 89 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 CARSP49589 748 aaKnown RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 MRPS25P82663 173 aaKnown RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ILF2Q12905 390 aaKnown RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 OLIG2Q13516 323 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 HLTFQ14527 1009 aaKnown RBP eCLIP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 POU6F1Q14863 301 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 SLMAPQ14BN4 828 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ACOX1Q15067 660 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 GPR33Q49SQ1 333 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 SETMARQ53H47 684 aaPredicted RBP5.68□□□□□ -1.5
SCAF11-213ENST00000550629 FNBP1LQ5T0N5 605 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 FAM182AQ5T1J6 154 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 CERCAMQ5T4B2 595 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 SYCP2LQ5T4T6 812 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TSTD2Q5T7W7 516 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 KIAA0895LQ68EN5 471 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3GQ6DHY5 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 TBC1D3CQ6IPX1 549 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 ZNF449Q6P9G9 518 aa5.68□□□□□ -1.5
SCAF11-213ENST00000550629 CYS1Q717R9 158 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms