RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	GON4L	Q3T8J9	2241 aa		11.31	□□□□□ -0.6
CNOT2-223	ENST00000550160		A6NCN8	305 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	OR52A4P	A6NMU1	304 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160		B4DGG1	531 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	LMO7DN	F2Z398	122 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	NPHS1	O60500	1241 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	SDC3	O75056	442 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	SUPT7L	O94864	414 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	VIP	P01282	170 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	FGF3	P11487	239 aa	Predicted RBP	11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	CCND1	P24385	295 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	EEF1D	P29692	281 aa	Known RBP	11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	CCT8	P50990	548 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	ATXN3	P54252	364 aa	Predicted RBP	11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	NAGLU	P54802	743 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	PRKG2	Q13237	762 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	ARHGAP19	Q14CB8	494 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	CLCA4	Q14CN2	919 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	PCBP2	Q15366	365 aa	Known RBP eCLIP	11.3	□□□□□ -0.6	4e-7	■□□□□ 8.4
CNOT2-223	ENST00000550160	ZNF423	Q2M1K9	1284 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	IYD	Q6PHW0	289 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	RGS9BP	Q6ZS82	235 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	LRRC70	Q7Z2Q7	622 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	MAPK15	Q8TD08	544 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	ZNF75CP	Q92670	426 aa	Predicted RBP	11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	CNDP1	Q96KN2	507 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	CAMK1G	Q96NX5	476 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	TMEM237	Q96Q45	408 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	PKP4	Q99569	1192 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	KIR3DX1	Q9H7L2	352 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	EML4	Q9HC35	981 aa	Known RBP	11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	CAPN10	Q9HC96	672 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	PTBP2	Q9UKA9	531 aa	Known RBP	11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	GMEB2	Q9UKD1	530 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	ST14	Q9Y5Y6	855 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160	LRP4	O75096	1905 aa		11.3	□□□□□ -0.6
CNOT2-223	ENST00000550160		A0A1B0GTQ1	180 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	ARHGAP33	O14559	1287 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	KHNYN	O15037	678 aa	Known RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	CCNT2	O60583	730 aa	Known RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	KATNA1	O75449	491 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	STK16	O75716	305 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	HSPA4L	O95757	839 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	MLYCD	O95822	493 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	SLC16A8	O95907	504 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	CELA2B	P08218	269 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	VIM	P08670	466 aa	Known RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	ALPPL2	P10696	532 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	XRCC1	P18887	633 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	EPHA8	P29322	1005 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	SHMT2	P34897	504 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	GGT5	P36269	586 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	HSPA7	P48741	367 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	RCN2	Q14257	317 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	HLA-B	Q31612	363 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	PRAMEF14	Q5SWL7	426 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	ZNF678	Q5SXM1	525 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	TTC19	Q6DKK2	380 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	CAPN13	Q6MZZ7	669 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	DUS1L	Q6P1R4	473 aa	Known RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	AGTRAP	Q6RW13	159 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	MBOAT1	Q6ZNC8	495 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	ZCCHC23	Q6ZST2	131 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	HOMEZ	Q8IX15	550 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	SFRP1	Q8N474	314 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	SH3KBP1	Q96B97	665 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	GATA5	Q9BWX5	397 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	C1QTNF3	Q9BXJ4	246 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	CD244	Q9BZW8	370 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	NSRP1	Q9H0G5	558 aa	Known RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	ARRDC1-AS1	Q9H2J1	176 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	GAREM1	Q9H706	876 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	THAP1	Q9NVV9	213 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	STOX2	Q9P2F5	926 aa	Predicted RBP	11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	CPNE7	Q9UBL6	633 aa		11.29	□□□□□ -0.6
CNOT2-223	ENST00000550160	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	TCP11X1	B4DZS4	312 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160		K7EPI3	171 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	YY2	O15391	372 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	WDR47	O94967	919 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	SIX3	O95343	332 aa	Predicted RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	RET	P07949	1114 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	RPS17	P08708	135 aa	Known RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	NUDT7	P0C024	238 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	IMPA1	P29218	277 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	LSP1	P33241	339 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	ARL1	P40616	181 aa	Predicted RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	SLC19A1	P41440	591 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	SLC1A6	P48664	564 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	AGTR2	P50052	363 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	RAB28	P51157	221 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	PNLIPRP1	P54315	467 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	ABCE1	P61221	599 aa	Known RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	BNC1	Q01954	994 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	HHEX	Q03014	270 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	BST1	Q10588	318 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	NAE1	Q13564	534 aa		11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	TSTA3	Q13630	321 aa	Predicted RBP	11.28	□□□□□ -0.6
CNOT2-223	ENST00000550160	PLCL1	Q15111	1095 aa		11.28	□□□□□ -0.6

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