RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 FAR1Q8WVX9 515 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 FKBP10Q96AY3 582 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 CHP1Q99653 195 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ANP32EQ9BTT0 268 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 NDC1Q9BTX1 674 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 FICDQ9BVA6 458 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 WDR54Q9H977 334 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ENAMQ9NRM1 1142 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 TXLNGQ9NUQ3 528 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ZNHIT6Q9NWK9 470 aaKnown RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 IFNKQ9P0W0 207 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 DHCR7Q9UBM7 475 aaKnown RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 FEZ2Q9UHY8 353 aaPredicted RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 PLCL2Q9UPR0 1127 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 HYOU1Q9Y4L1 999 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 ALG6Q9Y672 507 aa9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 SNRNP200O75643 2136 aaKnown RBP9.49□□□□□ -0.89
TRAFD1-207ENST00000550051 CNTRLQ7Z7A1 2325 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 A0A0J9YY10 115 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 A0A1B0GUH1 482 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 HEATR9A2RTY3 570 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 GOLGA6L19H0YKK7 550 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 MASP2O00187 686 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 E2F3O00716 465 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 LIN7AO14910 233 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 SPOPO43791 374 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 AP2A2O94973 939 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 CTSBP07858 339 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 STSP08842 583 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 CHRM5P08912 532 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 PIM1P11309 404 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 TNNT1P13805 278 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 PRF1P14222 555 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 PSMA3P25788 255 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 ACRV1P26436 265 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 RBL1P28749 1068 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 CDKN1CP49918 316 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 ARSFP54793 590 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 PRPSAP1Q14558 356 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 KIR2DS3Q14952 304 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 HIF1AQ16665 826 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 AGAP7PQ5VUJ5 663 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 FCRL6Q6DN72 434 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 CAVIN1Q6NZI2 390 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 BBS12Q6ZW61 710 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 LAPTM4BQ86VI4 370 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 SERPINA9Q86WD7 417 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 TMEM151BQ8IW70 566 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 KLHDC8BQ8IXV7 354 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 CLDN19Q8N6F1 224 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 OR5AR1Q8NGP9 310 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 DNAJB14Q8TBM8 379 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 MOCOSQ96EN8 888 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 CCDC42Q96M95 316 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 AGAP4Q96P64 663 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 PPP1R2P1Q96PQ5 205 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 LMF1Q96S06 567 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 HGH1Q9BTY7 390 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 SLC26A1Q9H2B4 701 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 RUBCNLQ9H714 662 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 NHEJ1Q9H9Q4 299 aaPredicted RBP9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 SPHK1Q9NYA1 384 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 OSGIN2Q9Y236 505 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 EFR3BQ9Y2G0 817 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 CSAG2Q9Y5P2 127 aa9.48□□□□□ -0.89
TRAFD1-207ENST00000550051 APCP25054 2843 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 APOC4-APOC2K7ER74 178 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 QSOX1O00391 747 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 SOCS6O14544 535 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 AP2A1O95782 977 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 APOC2P02655 101 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 ALAS2P22557 587 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 MC4RP32245 332 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 TMPRSS15P98073 1019 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 PLOD1Q02809 727 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 TRIM14Q14142 442 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 ZNF169Q14929 603 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 TLR1Q15399 786 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 ANKRD20A2Q5SQ80 823 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 ANKRD20A1Q5TYW2 823 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 ANKRD20A3Q5VUR7 823 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 YOD1Q5VVQ6 348 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 KIRREL2Q6UWL6 708 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 TRIM73Q86UV7 250 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 TMTC1Q8IUR5 882 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 MCATQ8IVS2 390 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 OR5K2Q8NHB8 316 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 DLG3Q92796 817 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 RELTQ969Z4 430 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 CDKN2AIPNLQ96HQ2 116 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 APOL2Q9BQE5 337 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 FERMT1Q9BQL6 677 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 LHPPQ9H008 270 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 MRM3Q9HC36 420 aaKnown RBP9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 SLC6A20Q9NP91 592 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 SPTLC3Q9NUV7 552 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 NLE1Q9NVX2 485 aaPredicted RBP9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 EURLQ9NYK6 297 aa9.47□□□□□ -0.89
TRAFD1-207ENST00000550051 IL1RAPL1Q9NZN1 696 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms