RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SPATA19Q7Z5L4 167 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ZBTB46Q86UZ6 589 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 TSC22D3Q99576 134 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 SLC6A13Q9NSD5 602 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 UTS2RQ9UKP6 389 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 GFRA2O00451 464 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 SERPIND1P05546 499 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 BCKDHAP12694 445 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 LRRC23Q53EV4 343 aaPredicted RBP12.41□□□□□ -0.42
SCAF11-209ENST00000547018 FAM78AQ5JUQ0 283 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 HMBOX1Q6NT76 420 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF621Q6ZSS3 439 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 TMPRSS11BQ86T26 416 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 CHPFQ8IZ52 775 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 HS3ST5Q8IZT8 346 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF786Q8N393 782 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 RASGEF1AQ8N9B8 481 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ASZ1Q8WWH4 475 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 INPP5KQ9BT40 448 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 ACTL8Q9H568 366 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 RPF2Q9H7B2 306 aaKnown RBP12.41□□□□□ -0.42
SCAF11-209ENST00000547018 SUCOQ9UBS9 1254 aaKnown RBP12.41□□□□□ -0.42
SCAF11-209ENST00000547018 VPS13AQ96RL7 3174 aa12.41□□□□□ -0.42
SCAF11-209ENST00000547018 RECQL5O94762 991 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-209ENST00000547018 DIRAS1O95057 198 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 YAP1P46937 504 aaKnown RBP12.4□□□□□ -0.42
SCAF11-209ENST00000547018 RCAN2Q14206 197 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 OGFRL1Q5TC84 451 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-209ENST00000547018 OR4F3Q6IEY1 312 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 CYP2U1Q7Z449 544 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 AHI1Q8N157 1196 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 FAM86B1Q8N7N1 296 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 FGF13Q92913 245 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 TMEM125Q96AQ2 219 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 NSMCE2Q96MF7 247 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 KXD1Q9BQD3 176 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 ACPTQ9BZG2 426 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 SH3BP4Q9P0V3 963 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 TBC1D14Q9P2M4 693 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 CD300AQ9UGN4 299 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 GNG14A0A1W2PPG7 69 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF682O95780 498 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 CYP2A6P11509 494 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-209ENST00000547018 CYP2A7P20853 494 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 VIPR1P32241 457 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 CHN2P52757 468 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 CYP4F2P78329 520 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 PRKCQQ04759 706 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 ZNF77Q15935 545 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 C2orf27AQ580R0 203 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 FOXB2Q5VYV0 432 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 ERAP2Q6P179 960 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 MACC1Q6ZN28 852 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 EFL1Q7Z2Z2 1120 aaKnown RBP12.4□□□□□ -0.42
SCAF11-209ENST00000547018 FAM124AQ86V42 546 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 FAM47BQ8NA70 645 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 FAM162AQ96A26 154 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 HOPXQ9BPY8 73 aaPredicted RBP12.4□□□□□ -0.42
SCAF11-209ENST00000547018 Q9H521 79 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 SLC32A1Q9H598 525 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 LTB4R2Q9NPC1 389 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 LZTS1Q9Y250 596 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 INVSQ9Y283 1065 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 SPTBP11277 2137 aa12.4□□□□□ -0.42
SCAF11-209ENST00000547018 PRSS51A0A1B0GVH4 220 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 E7EQ34 232 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 SNUPNO95149 360 aaKnown RBP12.4□□□□□ -0.43
SCAF11-209ENST00000547018 FASP25445 335 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 RPL26P61254 145 aaKnown RBP12.4□□□□□ -0.43
SCAF11-209ENST00000547018 PCBP2Q15366 365 aaKnown RBP eCLIP12.4□□□□□ -0.43
SCAF11-209ENST00000547018 ANKRD34AQ69YU3 496 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 STK32CQ86UX6 486 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 TMEM102Q8N9M5 508 aaPredicted RBP12.4□□□□□ -0.43
SCAF11-209ENST00000547018 OR7A2PQ8NGA2 310 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 SLC13A3Q8WWT9 602 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.43
SCAF11-209ENST00000547018 ROPN1LQ96C74 230 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 CGREF1Q99674 301 aa12.4□□□□□ -0.43
SCAF11-209ENST00000547018 A0A0G2JN53 185 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 FAM234BA2RU67 622 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 ARHGEF33A8MVX0 844 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 EI24O14681 340 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PRAMEF4O60810 478 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 VPS4BO75351 444 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PENKP01210 267 aaPredicted RBP12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PGRP06401 933 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PRKACGP22612 351 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 AOAHP28039 575 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 S100A3P33764 101 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 GSSP48637 474 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 XKR7Q5GH72 579 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PRAMEF9Q5VWM5 478 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 OR52E8Q6IFG1 317 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 LIPIQ6XZB0 460 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 PPP3R2Q96LZ3 170 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 NUSAP1Q9BXS6 441 aaKnown RBP12.39□□□□□ -0.43
SCAF11-209ENST00000547018 MRPL40Q9NQ50 206 aaKnown RBP12.39□□□□□ -0.43
SCAF11-209ENST00000547018 TM7SF3Q9NS93 570 aa12.39□□□□□ -0.43
SCAF11-209ENST00000547018 A6NHS1 94 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms