RNA–Protein interactions for RNA: ENST00000546160.5

PDE4D-226, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 7,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-226ENST00000546160 PTDSS1P48651 473 aaKnown RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 EIF2B2P49770 351 aaKnown RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CRISP3P54108 245 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PRSS55Q6UWB4 352 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 RTL10Q7L3V2 364 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 NUDT13Q86X67 352 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 TSSK3Q96PN8 268 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 TRIB3Q96RU7 358 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 RAD9AQ99638 391 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 BCO2Q9BYV7 579 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 MKKSQ9NPJ1 570 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 EGFL7Q9UHF1 273 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 H3BUI4 141 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 AP5Z1O43299 807 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PLIN3O60664 434 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PLGP00747 810 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 HRH2P25021 359 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 DNASE1L1P49184 302 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ACTR1AP61163 376 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 TLE2Q04725 743 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CYP4F3Q08477 520 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ENPP2Q13822 863 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 GBX1Q14549 363 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 IFI44LQ53G44 452 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PHF19Q5T6S3 580 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 RINLQ6ZS11 566 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 RASSF6Q6ZTQ3 369 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 HMGB4Q8WW32 186 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 TMEM209Q96SK2 561 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PCDHB18PQ96TA0 734 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 MS4A12Q9NXJ0 267 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PDP1Q9P0J1 537 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 IKZF2Q9UKS7 526 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CNOT6Q9ULM6 557 aaKnown RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 TELO2Q9Y4R8 837 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 YIPF1Q9Y548 306 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PCDHGC4Q9Y5F7 938 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 RGPD4Q7Z3J3 1758 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 WTIPA6NIX2 430 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 OR5K4A6NMS3 321 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ARHGEF33A8MVX0 844 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 HOXB2P14652 356 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CCND3P30281 292 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ALYREFQ86V81 257 aaKnown RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 C12orf40Q86WS4 652 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CCDC36Q8IYA8 594 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ARL10Q8N8L6 244 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 FBXO15Q8NCQ5 510 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CMASQ8NFW8 434 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 C8orf33Q9H7E9 229 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 MOCS1Q9NZB8 636 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 VPS29Q9UBQ0 182 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 GLS2Q9UI32 602 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 GPC6Q9Y625 555 aaPredicted RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 DCLK1O15075 740 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 SYPP08247 313 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ADARP55265 1226 aaKnown RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ERVK-8P63133 956 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CYP4F8P98187 520 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 PLGLB1Q02325 96 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 HSPB3Q12988 150 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 KLF10Q13118 480 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 DCTN2Q13561 401 aaKnown RBP6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CMC1Q7Z7K0 106 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 FUKQ8N0W3 1084 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 SPATA6LQ8N4H0 392 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ZMIZ2Q8NF64 920 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 CERS4Q9HA82 394 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 IFT46Q9NQC8 304 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 TMEM248Q9NWD8 314 aa6.28□□□□□ -1.4
PDE4D-226ENST00000546160 ATP6AP2A0A1C7CYW4 349 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 IDH3BO43837 385 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 ATP6AP2O75787 350 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 NCBP2P52298 156 aaKnown RBP eCLIP6.27□□□□□ -1.4
PDE4D-226ENST00000546160 MYLK3Q32MK0 819 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 PLEKHG4Q58EX7 1191 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 TRPV1Q8NER1 839 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 OR2AP1Q8NGE2 309 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 BRI3BPQ8WY22 251 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 PEX13Q92968 403 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 LDAHQ9H6V9 325 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.4
PDE4D-226ENST00000546160 PNPOQ9NVS9 261 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 OSER1Q9NX31 292 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 ARL5AQ9Y689 179 aa6.27□□□□□ -1.4
PDE4D-226ENST00000546160 PSIP1O75475 530 aaKnown RBP6.27□□□□□ -1.41
PDE4D-226ENST00000546160 RBMXL2O75526 392 aaKnown RBP6.27□□□□□ -1.41
PDE4D-226ENST00000546160 BANF1O75531 89 aa6.27□□□□□ -1.41
PDE4D-226ENST00000546160 MT-CYBP00156 380 aaPredicted RBP6.27□□□□□ -1.41
PDE4D-226ENST00000546160 EPOP01588 193 aa6.27□□□□□ -1.41
PDE4D-226ENST00000546160 MPSTP25325 297 aa6.27□□□□□ -1.41
PDE4D-226ENST00000546160 SLC7A1P30825 629 aa6.27□□□□□ -1.41
PDE4D-226ENST00000546160 PLEKHS1Q5SXH7 462 aa6.27□□□□□ -1.41
PDE4D-226ENST00000546160 ZNF572Q7Z3I7 529 aaPredicted RBP6.27□□□□□ -1.41
PDE4D-226ENST00000546160 CMTR2Q8IYT2 770 aaKnown RBP6.27□□□□□ -1.41
PDE4D-226ENST00000546160 FAM46DQ8NEK8 389 aa6.27□□□□□ -1.41
PDE4D-226ENST00000546160 KIAA1143Q96AT1 154 aaPredicted RBP6.27□□□□□ -1.41
PDE4D-226ENST00000546160 PPM1MQ96MI6 270 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms